Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC009414.1-201ENST00000427200 443 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 AL034418.1-201ENST00000448675 860 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 AC025181.1-201ENST00000477507 416 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 CKS1BP7-201ENST00000522230 235 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM4Q9C037 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 AP000889.2-201ENST00000532684 490 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 AC025811.1-201ENST00000604312 472 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 AC128687.1-201ENST00000605304 619 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM4Q9C037 MIR6076-201ENST00000617521 113 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 AL360181.4-201ENST00000621752 134 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 AC097372.4-201ENST00000625025 466 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 CRYM-AS1-204ENST00000637983 556 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 AC006020.1-201ENST00000420179 1854 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
TRIM4Q9C037 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
TRIM4Q9C037 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.4□□□□□ -2.02
TRIM4Q9C037 AC007342.9-201ENST00000623877 1385 ntBASIC2.4□□□□□ -2.02
TRIM4Q9C037 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM4Q9C037 AP006437.1-201ENST00000641440 3685 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 Y_RNA.40-201ENST00000362645 93 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 RNU6-989P-201ENST00000362756 107 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 RNU6-1249P-201ENST00000363237 111 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TRIM4Q9C037 AL513331.1-201ENST00000411908 397 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM4Q9C037 DPH3P2-201ENST00000422618 250 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AC006548.1-201ENST00000427470 102 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AL645638.1-201ENST00000440519 361 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AC124916.1-201ENST00000444020 547 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.4□□□□□ -2.03
TRIM4Q9C037 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.4□□□□□ -2.03
TRIM4Q9C037 RPL30P14-201ENST00000482744 348 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AC090255.1-201ENST00000495779 349 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM4Q9C037 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.4□□□□□ -2.03
TRIM4Q9C037 SNORA31.8-201ENST00000516327 108 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 RNA5SP471-201ENST00000516971 106 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AC009268.1-201ENST00000561352 1203 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AMZ2P1-203ENST00000565833 850 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AC090666.1-201ENST00000578241 445 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 RPS15AP11-201ENST00000594193 385 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AC046143.2-201ENST00000609789 160 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 CR381572.1-201ENST00000625098 102 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 CU459211.1-201ENST00000635667 749 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AC119674.1-220ENST00000641502 1048 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM4Q9C037 CKAP2P1-201ENST00000555477 2049 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 AC104454.1-201ENST00000421341 1401 ntBASIC2.4□□□□□ -2.03
TRIM4Q9C037 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM4Q9C037 RNU6-1159P-201ENST00000362933 107 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 RNU6-76P-201ENST00000384060 104 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 RNU6-1226P-201ENST00000384317 107 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 SSXP10-201ENST00000402595 565 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 AL162578.1-201ENST00000406202 378 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 RPL23AP36-201ENST00000413895 458 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 HMGN2P38-201ENST00000423806 265 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 MTCYBP34-201ENST00000439552 670 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 DPPA3P1-201ENST00000448050 469 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 HMGN2P23-201ENST00000456759 269 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 AC090515.1-201ENST00000465295 476 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 RPL30P9-201ENST00000465586 330 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 AC108734.3-201ENST00000481241 1165 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 AC113155.1-201ENST00000511141 769 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 RNA5SP320-201ENST00000516263 124 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 HAUS1P3-201ENST00000523909 662 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM4Q9C037 AC009127.3-201ENST00000570531 403 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM4Q9C037 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.39□□□□□ -2.03
TRIM4Q9C037 GLUD1P4-201ENST00000590914 418 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 U73023.1-201ENST00000603134 700 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 AP001330.4-201ENST00000604350 154 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
TRIM4Q9C037 AC107905.1-201ENST00000616204 426 ntBASIC2.39□□□□□ -2.03
TRIM4Q9C037 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM4Q9C037 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM4Q9C037 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM4Q9C037 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM4Q9C037 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TRIM4Q9C037 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM4Q9C037 RPS4XP3-201ENST00000398541 413 ntBASIC2.38□□□□□ -2.03
TRIM4Q9C037 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM4Q9C037 AC114973.1-201ENST00000429057 632 ntBASIC2.38□□□□□ -2.03
TRIM4Q9C037 FCF1P1-201ENST00000432690 571 ntBASIC2.38□□□□□ -2.03
TRIM4Q9C037 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM4Q9C037 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM4Q9C037 AL590664.1-201ENST00000448065 339 ntBASIC2.38□□□□□ -2.03
TRIM4Q9C037 RPL23AP70-201ENST00000483361 460 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms