Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 ATG10-AS1-201ENST00000504846 648 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 MIR5000-201ENST00000577717 103 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 AL627230.5-201ENST00000619807 58 ntBASIC1.39□□□□□ -2.19
COL12A1Q99715 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.39□□□□□ -2.19
COL12A1Q99715 DHFRP5-201ENST00000406944 564 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.38□□□□□ -2.19
COL12A1Q99715 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.38□□□□□ -2.19
COL12A1Q99715 RFC5P1-201ENST00000454419 874 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 AC109486.1-201ENST00000486833 374 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 SETP7-201ENST00000552169 453 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.38□□□□□ -2.19
COL12A1Q99715 ABI1P1-201ENST00000603375 1120 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 AP003499.2-201ENST00000624100 483 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 AC110774.1-201ENST00000623567 2018 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 AL513185.2-201ENST00000425543 193 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.38□□□□□ -2.19
COL12A1Q99715 TBCAP3-201ENST00000512475 312 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 SNORA31.15-201ENST00000516771 132 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 CYP3A137P-201ENST00000562436 69 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 AL512283.1-201ENST00000606756 1384 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
COL12A1Q99715 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
COL12A1Q99715 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.38□□□□□ -2.19
COL12A1Q99715 RNU6-717P-201ENST00000459076 104 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 RPL31P41-201ENST00000477967 372 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 FABP5P6-201ENST00000510588 409 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.38□□□□□ -2.19
COL12A1Q99715 AC008127.2-201ENST00000549925 1075 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.38□□□□□ -2.19
COL12A1Q99715 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.38□□□□□ -2.19
COL12A1Q99715 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.38□□□□□ -2.19
COL12A1Q99715 AC112191.3-201ENST00000604371 277 ntBASIC1.38□□□□□ -2.19
COL12A1Q99715 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
COL12A1Q99715 MIR373-201ENST00000362273 69 ntBASIC1.37□□□□□ -2.19
COL12A1Q99715 AC096992.1-201ENST00000459808 709 ntBASIC1.37□□□□□ -2.19
COL12A1Q99715 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.37□□□□□ -2.19
COL12A1Q99715 AL137072.1-201ENST00000603444 466 ntBASIC1.37□□□□□ -2.19
COL12A1Q99715 MIR502-201ENST00000606349 86 ntBASIC1.37□□□□□ -2.19
COL12A1Q99715 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.37□□□□□ -2.19
COL12A1Q99715 SNORA50A-202ENST00000629536 136 ntBASIC1.37□□□□□ -2.19
COL12A1Q99715 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
COL12A1Q99715 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.37□□□□□ -2.19
COL12A1Q99715 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.37□□□□□ -2.19
COL12A1Q99715 AC078918.1-201ENST00000498515 228 ntBASIC1.37□□□□□ -2.19
COL12A1Q99715 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.37□□□□□ -2.19
COL12A1Q99715 RNA5SP27-201ENST00000363839 119 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.36□□□□□ -2.19
COL12A1Q99715 AIMP1P2-201ENST00000425294 312 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 ARF4P2-201ENST00000430209 526 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 FTH1P12-201ENST00000432137 551 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 HIGD1AP11-201ENST00000438361 280 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 MTCYBP12-201ENST00000440559 1134 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 AC079776.3-201ENST00000450665 370 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.36□□□□□ -2.19
COL12A1Q99715 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.36□□□□□ -2.19
COL12A1Q99715 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.36□□□□□ -2.19
COL12A1Q99715 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.36□□□□□ -2.19
COL12A1Q99715 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL12A1Q99715 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
COL12A1Q99715 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
COL12A1Q99715 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
COL12A1Q99715 AC005517.2-201ENST00000424673 553 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.36□□□□□ -2.19
COL12A1Q99715 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.36□□□□□ -2.19
COL12A1Q99715 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.36□□□□□ -2.19
COL12A1Q99715 AC034102.8-201ENST00000615146 484 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.36□□□□□ -2.19
COL12A1Q99715 AC006026.1-201ENST00000444025 1803 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL12A1Q99715 SGO1P2-201ENST00000429458 1589 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 RNU4-13P-201ENST00000364019 141 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 RNA5SP138-201ENST00000365098 114 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 RNA5SP338-201ENST00000410495 85 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 RNU2-22P-201ENST00000411266 212 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 RWDD4P2-201ENST00000426392 563 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 AL645568.3-201ENST00000433683 316 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 AL021397.1-201ENST00000451806 248 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 AL583843.1-201ENST00000456070 346 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 RWDD4P1-201ENST00000488019 565 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.36□□□□□ -2.19
COL12A1Q99715 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.36□□□□□ -2.19
COL12A1Q99715 PDCD5P1-201ENST00000543528 309 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 VN1R79P-201ENST00000593540 513 ntBASIC1.36□□□□□ -2.19
COL12A1Q99715 RBBP8P1-201ENST00000449447 1844 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL12A1Q99715 RNU4-91P-201ENST00000364778 135 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 NEK4P1-201ENST00000433383 879 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 OR7L1P-201ENST00000456181 380 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 RNU6-405P-201ENST00000516637 110 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 RNU6-467P-201ENST00000517027 110 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 AC104986.1-201ENST00000517978 436 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.35□□□□□ -2.19
COL12A1Q99715 AC083806.3-201ENST00000614016 455 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.35□□□□□ -2.19
COL12A1Q99715 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
COL12A1Q99715 AC092881.1-201ENST00000638218 2733 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 AC091152.2-201ENST00000591628 2569 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.35□□□□□ -2.19
COL12A1Q99715 IFNWP4-201ENST00000453148 294 ntBASIC1.35□□□□□ -2.19
COL12A1Q99715 DUXAP8-207ENST00000456786 622 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms