Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP88Q99567 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AC105252.1-201ENST00000503089 286 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 MLLT10P2-201ENST00000506434 249 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AC010493.1-201ENST00000513479 292 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP88Q99567 DEFB108A-201ENST00000530110 222 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AC016957.1-201ENST00000534895 309 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AC018630.1-201ENST00000541376 925 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP88Q99567 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP88Q99567 AC087883.1-201ENST00000551882 391 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AC006960.3-201ENST00000561845 705 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.51□□□□□ -1.69
NUP88Q99567 VN1R79P-201ENST00000593540 513 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AC244505.7-201ENST00000599675 272 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP88Q99567 AC008277.2-201ENST00000605196 797 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AL021997.1-201ENST00000605757 193 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP88Q99567 AC005344.1-201ENST00000613391 459 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 AC026368.1-201ENST00000614934 690 ntBASIC4.51□□□□□ -1.69
NUP88Q99567 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.51□□□□□ -1.69
NUP88Q99567 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUP88Q99567 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NUP88Q99567 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP88Q99567 AP004289.2-201ENST00000444413 1457 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUP88Q99567 RN7SKP226-201ENST00000364912 300 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP88Q99567 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUP88Q99567 SNORA20.2-201ENST00000383922 131 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 MIR708-201ENST00000390708 88 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 SNORA3.3-201ENST00000408712 125 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 RNU4-65P-201ENST00000410473 140 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 RNU2-62P-201ENST00000410868 191 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 AC007283.2-201ENST00000424739 197 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP88Q99567 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP88Q99567 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP88Q99567 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.5□□□□□ -1.69
NUP88Q99567 MTND1P1-201ENST00000445453 368 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 RPL9P33-201ENST00000484311 566 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 RPL7P23-201ENST00000493874 747 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 RPL31P61-201ENST00000496160 376 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 AC004062.1-201ENST00000509926 645 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.5□□□□□ -1.69
NUP88Q99567 AC114797.1-201ENST00000514003 728 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.5□□□□□ -1.69
NUP88Q99567 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP88Q99567 AC125611.2-201ENST00000551907 647 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 AC087481.2-201ENST00000565492 330 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP88Q99567 AL022099.1-201ENST00000604551 712 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 AL034351.1-201ENST00000605288 668 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 AC245517.5-201ENST00000611529 162 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 AL138713.1-201ENST00000624026 2130 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 AC067931.1-201ENST00000624190 671 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 AC019226.1-201ENST00000625666 515 ntBASIC4.5□□□□□ -1.69
NUP88Q99567 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NUP88Q99567 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NUP88Q99567 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUP88Q99567 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUP88Q99567 RN7SKP177-201ENST00000410567 355 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AC093578.1-201ENST00000415219 368 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP88Q99567 UBE2FP1-201ENST00000416536 447 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 EI24P1-201ENST00000416584 867 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP88Q99567 AC079780.1-201ENST00000428259 207 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 FTH1P6-201ENST00000430768 320 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AC091286.1-201ENST00000431233 461 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AC087650.1-201ENST00000431445 468 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AC011742.1-201ENST00000431448 434 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AC004866.2-201ENST00000438285 481 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 HMGB1P37-201ENST00000439613 609 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP88Q99567 HMGN2P21-201ENST00000447764 270 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AL136380.1-201ENST00000447970 162 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP88Q99567 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 RPL21P11-201ENST00000461458 483 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP88Q99567 AP000926.1-201ENST00000479573 241 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP88Q99567 RN7SL271P-201ENST00000487601 295 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AC135721.1-201ENST00000497954 479 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
NUP88Q99567 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP88Q99567 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NUP88Q99567 DEFB108D-201ENST00000527787 222 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP88Q99567 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.49□□□□□ -1.69
NUP88Q99567 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP88Q99567 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP88Q99567 GNRHR2P1-201ENST00000555315 631 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AL133153.1-201ENST00000557756 303 ntBASIC4.49□□□□□ -1.69
NUP88Q99567 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms