Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 GNG5P1-201ENST00000255500 204 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RNU6-223P-201ENST00000362830 107 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 U8.3-201ENST00000363321 132 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RNU6-173P-201ENST00000364215 104 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RNU4-75P-201ENST00000364621 146 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AL590704.1-201ENST00000402856 794 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 MRPL42P2-201ENST00000403169 426 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RN7SKP285-201ENST00000410137 318 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RNU4-65P-201ENST00000410473 140 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RNU2-16P-201ENST00000410712 136 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 HMGB3P23-201ENST00000414981 585 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 VDAC1P3-201ENST00000434069 851 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RPS4XP4-201ENST00000443195 763 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 GAPDHP17-201ENST00000449858 1001 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AC108059.3-201ENST00000456388 214 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RPL36AP13-201ENST00000457490 317 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AC034236.1-201ENST00000469891 373 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AP002812.1-201ENST00000495378 474 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RN7SKP244-201ENST00000516513 307 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RNU1-45P-201ENST00000517191 141 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 SNRPGP16-201ENST00000533275 226 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 MIR5684-201ENST00000585074 65 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 RMST_8.1-201ENST00000610287 165 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AC245517.5-201ENST00000611529 162 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AL713922.2-201ENST00000619384 716 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AL773545.4-201ENST00000637262 310 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AL513478.4-201ENST00000641636 310 ntBASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC9Q96Q05 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 FARSBP1-201ENST00000435808 1778 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 SNORA60-201ENST00000362396 134 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 PPP1R11P2-201ENST00000423543 382 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AL451062.2-201ENST00000427515 271 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 MTATP6P4-201ENST00000427725 675 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AL358472.1-201ENST00000431295 329 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AC009961.2-201ENST00000435771 251 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 TPT1P7-201ENST00000458300 517 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 RPL29P14-201ENST00000495837 428 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 RNU2-58P-201ENST00000516403 183 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 RNU6-405P-201ENST00000516637 110 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 SNORA18.6-201ENST00000516792 115 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 DEFB108A-201ENST00000530110 222 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 RPL23AP87-202ENST00000573039 466 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 DUXAP4-201ENST00000603046 613 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AC103710.1-201ENST00000610003 901 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AL589743.7-201ENST00000612637 233 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AC006133.1-201ENST00000617106 264 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 AP005264.7-201ENST00000625003 745 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 PISRT1-201ENST00000626175 531 ntBASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC9Q96Q05 DDX10P1-201ENST00000448545 1933 ntBASIC3.91□□□□□ -1.78
TRAPPC9Q96Q05 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAPPC9Q96Q05 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
TRAPPC9Q96Q05 RNY4P34-201ENST00000364779 95 ntBASIC3.91□□□□□ -1.78
TRAPPC9Q96Q05 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TRAPPC9Q96Q05 RNU6-76P-201ENST00000384060 104 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms