Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AF250324.2-201ENST00000608299 610 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC007684.1-201ENST00000609671 477 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC090970.3-201ENST00000612566 866 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 MIR6500-201ENST00000622700 86 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 LRRC77P-213ENST00000637727 880 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 MTCO1P9-201ENST00000505577 1534 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC005832.2-201ENST00000538921 1430 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 RNA5SP97-201ENST00000365006 84 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 SNORD6-201ENST00000365444 73 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 RNU6-628P-201ENST00000410675 107 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 RNU2-37P-201ENST00000410695 177 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 RAB28P1-201ENST00000411517 641 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 RPS7P15-201ENST00000415804 584 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 OR1AA1P-201ENST00000419597 916 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AL451074.3-201ENST00000437709 472 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC083863.1-201ENST00000438811 231 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC010655.1-201ENST00000449336 292 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC020893.1-201ENST00000502452 580 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 Vault.3-201ENST00000516676 95 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AL133271.1-201ENST00000538229 291 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC012182.1-201ENST00000570133 895 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 OR4K8P-201ENST00000578842 1048 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AL592436.1-201ENST00000605135 558 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 MIR98-201ENST00000606724 119 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AL158211.4-201ENST00000606988 584 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 TUG1_1.1-201ENST00000610654 145 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 ZYXP1-201ENST00000617638 118 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC073534.2-201ENST00000620377 381 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 MIR4727-201ENST00000622232 55 ntBASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDK5RAP3Q96JB5 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDK5RAP3Q96JB5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDK5RAP3Q96JB5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
CDK5RAP3Q96JB5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDK5RAP3Q96JB5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 MIR19A-201ENST00000384878 82 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 MIR548F1-201ENST00000408667 84 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 HMGN1P24-201ENST00000412282 298 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AL137014.1-201ENST00000420490 1226 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AL117339.2-201ENST00000430475 180 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 FCF1P1-201ENST00000432690 571 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 TIMM9P1-201ENST00000436122 256 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 HSFY6P-201ENST00000445573 403 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 RPS24P6-201ENST00000452670 400 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC234775.1-201ENST00000454247 670 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 C1DP4-201ENST00000455429 424 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AL359385.1-201ENST00000456509 365 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 RPL23AP62-201ENST00000463396 453 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC126182.1-201ENST00000478134 357 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC069499.1-201ENST00000489433 509 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms