Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AC125611.1-201ENST00000549563 229 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 CYB5AP5-201ENST00000549779 389 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 MTND4LP25-201ENST00000570218 163 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 MTCO3P13-201ENST00000577757 781 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 MIR3162-201ENST00000581818 82 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AL022099.1-201ENST00000604551 712 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AC253576.2-201ENST00000618815 580 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 AC087821.2-201ENST00000637086 450 ntBASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
ECHDC3Q96DC8 ASNSP3-201ENST00000451989 1306 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC109315.1-201ENST00000584143 1347 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 RNU1-109P-201ENST00000383960 147 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 MIR34A-201ENST00000385130 110 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 RNU6-882P-201ENST00000391025 103 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AL512633.1-201ENST00000399931 655 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 RNU2-52P-201ENST00000410680 190 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 HMGN2P30-201ENST00000423237 256 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 RPL39P40-201ENST00000445481 146 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 VN1R10P-201ENST00000447106 875 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 SNRPGP6-201ENST00000451124 220 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC119751.5-201ENST00000514077 770 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 SNORA31.21-201ENST00000517180 77 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 RNU6-1261P-201ENST00000517194 104 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC087373.1-201ENST00000524920 491 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 MTCO3P15-201ENST00000526563 574 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 OR4R2P-201ENST00000530815 597 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC068339.2-201ENST00000534395 618 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AL133271.1-201ENST00000538229 291 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC125611.2-201ENST00000551907 647 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 NBEAP1-201ENST00000554452 979 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC023825.1-201ENST00000566704 1030 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 HMGB1P6-201ENST00000569046 646 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 BNIP3P24-201ENST00000593398 557 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC120053.1-201ENST00000607706 736 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC084824.5-201ENST00000612009 413 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AP003485.2-201ENST00000623636 610 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 SCARNA15.3-201ENST00000626315 122 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 SCARNA4.1-201ENST00000628597 123 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 U6.101-201ENST00000637707 76 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 MKKS-204ENST00000639674 192 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AC009812.4-201ENST00000569134 1805 ntBASIC2.68□□□□□ -1.98
ECHDC3Q96DC8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 SNORA63.3-201ENST00000362682 132 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 FO393413.1-201ENST00000402892 195 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AL079342.2-201ENST00000403367 482 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 RNA5SP492-201ENST00000411330 114 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AC103975.1-201ENST00000482506 483 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AC098799.1-201ENST00000504752 800 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 SEM1P1-201ENST00000506694 209 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AP000867.2-201ENST00000532468 320 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 MIR4672-201ENST00000583126 81 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AC020895.1-201ENST00000595362 272 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 RPL23AP78-201ENST00000599928 470 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 MTATP6P2-201ENST00000603319 678 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 HSPE1P7-201ENST00000604681 321 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AL035413.2-201ENST00000604801 525 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AL583856.2-201ENST00000606298 543 ntBASIC2.67□□□□□ -1.98
ECHDC3Q96DC8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms