Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 RNU5A-8P-201ENST00000364102 114 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 RPL7P60-201ENST00000397636 735 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 GSTA9P-201ENST00000406231 611 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AL583834.1-201ENST00000406943 343 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 MTND1P21-201ENST00000412991 285 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 RPS15AP12-201ENST00000419498 388 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AC019097.1-201ENST00000424783 735 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 RPL31P35-201ENST00000431058 377 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AL121877.1-201ENST00000453704 622 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AC108059.3-201ENST00000456388 214 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 RPL21P11-201ENST00000461458 483 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AP001486.1-201ENST00000463339 476 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 RNU6-1095P-201ENST00000516148 108 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AC107934.1-201ENST00000522215 217 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 KC877982.1-201ENST00000602313 470 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AC012669.1-201ENST00000603209 283 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AL158211.4-201ENST00000606988 584 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AC007038.2-201ENST00000608095 740 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AL391813.2-201ENST00000609113 322 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AL158209.2-201ENST00000619266 216 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AC136475.10-201ENST00000620253 385 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AC243312.2-201ENST00000623340 601 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 SCARNA15.3-201ENST00000626315 122 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 SCARNA4.1-201ENST00000628597 123 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AC244258.1-201ENST00000637553 1071 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 AC119674.1-207ENST00000641355 633 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 OR5H6-203ENST00000642105 978 ntBASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM43Q96BQ3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 XIAPP3-201ENST00000312918 795 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 RNU5E-1-201ENST00000362477 120 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 RNY4P16-201ENST00000364768 94 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 RNU6-516P-201ENST00000411381 104 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 OR1AA1P-201ENST00000419597 916 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 BEND7P1-201ENST00000422058 457 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AC092832.1-201ENST00000422934 400 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 ISCA1P1-201ENST00000426679 387 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 OR4K11P-201ENST00000431829 904 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 MTND3P21-201ENST00000433774 331 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AL121871.1-201ENST00000443413 436 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AL136380.1-201ENST00000447970 162 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 TPT1P14-201ENST00000448018 505 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AC126182.1-201ENST00000478134 357 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AF213884.2-201ENST00000510417 903 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 RN7SKP244-201ENST00000516513 307 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 HMGN1P28-201ENST00000521340 364 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AC022695.1-201ENST00000522089 237 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 ZNF519P2-201ENST00000557032 169 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 RNU1-30P-201ENST00000606575 163 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 MIR98-201ENST00000606724 119 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AL592295.2-201ENST00000612578 206 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 AC005086.4-201ENST00000623065 213 ntBASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM43Q96BQ3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AC068254.2-201ENST00000623938 3577 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 MIR19A-201ENST00000384878 82 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 MIR128-1-201ENST00000384921 82 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AC096664.2-201ENST00000411843 406 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AC104850.1-201ENST00000435940 476 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 RPL35AP22-201ENST00000436855 335 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 FTH1P25-201ENST00000447665 469 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AC079448.1-201ENST00000449377 373 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AL359385.1-201ENST00000456509 365 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 RPL23AP65-201ENST00000475608 468 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AP000926.1-201ENST00000479573 241 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms