Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-CQ95604 AC112187.1-201ENST00000455837 479 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 RNU1-88P-201ENST00000459274 128 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 AC091153.1-201ENST00000466297 402 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-CQ95604 RNU6-496P-201ENST00000516145 99 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 RNU6-861P-201ENST00000516745 106 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 SCARNA24.2-201ENST00000516968 130 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.92□□□□□ -1.46
HLA-CQ95604 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-CQ95604 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-CQ95604 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-CQ95604 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-CQ95604 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HLA-CQ95604 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-CQ95604 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-CQ95604 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HLA-CQ95604 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-CQ95604 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.91□□□□□ -1.46
HLA-CQ95604 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-CQ95604 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 AP001148.1-201ENST00000624124 2359 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 RNU4-90P-201ENST00000362773 141 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 SNORD50.1-201ENST00000362987 71 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 SNORA62-201ENST00000365493 153 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HLA-CQ95604 SNORA12.2-201ENST00000391040 156 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 RNU6-493P-201ENST00000391321 108 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 RNU4-64P-201ENST00000410795 131 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 Y_RNA.626-201ENST00000411288 95 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 RPL19P1-201ENST00000411635 428 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AL133482.1-201ENST00000415988 498 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AC093414.1-201ENST00000434712 514 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-CQ95604 AC079354.2-201ENST00000453523 154 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AC109925.1-201ENST00000478069 331 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AC022493.1-201ENST00000492984 337 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-CQ95604 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-CQ95604 GMPSP1-201ENST00000514075 579 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 RN7SKP147-201ENST00000517154 244 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.91□□□□□ -1.46
HLA-CQ95604 TRAV37-201ENST00000553906 342 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AL157871.3-201ENST00000557231 293 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-CQ95604 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-CQ95604 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AC087783.2-201ENST00000605070 562 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 U6.106-201ENST00000636360 105 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 AC011369.2-201ENST00000624423 1567 ntBASIC5.91□□□□□ -1.46
HLA-CQ95604 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-CQ95604 AL451142.2-201ENST00000429076 2090 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-CQ95604 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-CQ95604 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-CQ95604 AL137141.1-201ENST00000624622 4836 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-CQ95604 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-CQ95604 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-CQ95604 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-CQ95604 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-CQ95604 AC007685.1-201ENST00000329806 452 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 Y_RNA.44-201ENST00000362676 108 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 SNORD113-8-201ENST00000363497 74 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 SNORA51.8-201ENST00000384234 132 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 SNORD78.2-201ENST00000391076 69 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 SNORA53-201ENST00000391141 249 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 SNORD56-201ENST00000413522 71 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-CQ95604 RPL23AP22-201ENST00000437556 453 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-CQ95604 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-CQ95604 Y_RNA.662-201ENST00000516028 97 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 RNU7-200P-201ENST00000516105 62 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 SNORA31.22-201ENST00000517204 135 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 AC109479.2-201ENST00000517842 174 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 CASP1P1-201ENST00000526345 212 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-CQ95604 AC092490.3-201ENST00000545370 572 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-CQ95604 MIR4512-201ENST00000583257 77 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 AC021753.1-201ENST00000635724 168 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 AC074101.1-201ENST00000637861 241 ntBASIC5.9□□□□□ -1.46
HLA-CQ95604 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-CQ95604 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-CQ95604 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-CQ95604 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
HLA-CQ95604 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
HLA-CQ95604 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms