Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 FTH1P1-201ENST00000437933 532 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AC093156.1-201ENST00000440382 670 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 RPL21P89-201ENST00000444021 467 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AC079781.2-201ENST00000446424 169 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.74□□□□□ -1.65
ERCC4Q92889 BX276092.4-201ENST00000452056 248 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.74□□□□□ -1.65
ERCC4Q92889 snoU13.1-201ENST00000459157 104 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 RPS20P20-201ENST00000460498 340 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 RPS4XP10-201ENST00000465034 731 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.74□□□□□ -1.65
ERCC4Q92889 COX7A2P2-201ENST00000505291 250 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 SCARNA24.1-201ENST00000516465 137 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 IGKV2D-23-201ENST00000518179 286 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.74□□□□□ -1.65
ERCC4Q92889 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.74□□□□□ -1.65
ERCC4Q92889 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.74□□□□□ -1.65
ERCC4Q92889 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC4Q92889 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.74□□□□□ -1.65
ERCC4Q92889 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC4Q92889 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC4Q92889 MIR5096-201ENST00000583713 70 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AC113403.1-201ENST00000604910 193 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AC008785.1-201ENST00000624475 456 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 AL159972.1-201ENST00000625150 448 ntBASIC4.74□□□□□ -1.65
ERCC4Q92889 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC4Q92889 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC4Q92889 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC4Q92889 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC4Q92889 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC4Q92889 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC4Q92889 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC4Q92889 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ERCC4Q92889 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.73□□□□□ -1.65
ERCC4Q92889 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ERCC4Q92889 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ERCC4Q92889 RNU1-32P-201ENST00000363937 159 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 RNY1P12-201ENST00000364251 105 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.73□□□□□ -1.65
ERCC4Q92889 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.73□□□□□ -1.65
ERCC4Q92889 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.73□□□□□ -1.65
ERCC4Q92889 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.73□□□□□ -1.65
ERCC4Q92889 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.73□□□□□ -1.65
ERCC4Q92889 RPS29P19-201ENST00000479709 171 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 AC006517.1-201ENST00000480485 328 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 PCBP2P3-201ENST00000509726 843 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 LRRC34P2-201ENST00000514850 553 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 RNA5SP519-201ENST00000516480 119 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 RN7SKP277-201ENST00000516895 283 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 RAB9BP1-201ENST00000519581 626 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.73□□□□□ -1.65
ERCC4Q92889 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.73□□□□□ -1.65
ERCC4Q92889 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.73□□□□□ -1.65
ERCC4Q92889 AC105224.1-201ENST00000587055 421 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 AC068790.4-201ENST00000602474 263 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 uc_338.13-201ENST00000618243 179 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 AC002550.2-201ENST00000621246 394 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 AC093648.1-201ENST00000623546 606 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 MAPK10-373ENST00000641983 6772 ntBASIC4.73□□□□□ -1.65
ERCC4Q92889 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ERCC4Q92889 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ERCC4Q92889 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.73□□□□□ -1.65
ERCC4Q92889 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ERCC4Q92889 OR56B2P-202ENST00000641377 2453 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 NOL8P1-201ENST00000508336 3529 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AL158163.1-201ENST00000603915 1649 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
ERCC4Q92889 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.72□□□□□ -1.65
ERCC4Q92889 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.72□□□□□ -1.65
ERCC4Q92889 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ERCC4Q92889 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ERCC4Q92889 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.72□□□□□ -1.65
ERCC4Q92889 Y_RNA.86-201ENST00000363020 111 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 RNU5A-8P-201ENST00000364102 114 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.72□□□□□ -1.65
ERCC4Q92889 MIR1-2-201ENST00000384961 85 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 MIR129-1-201ENST00000384972 72 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AL354719.1-201ENST00000406535 843 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 SNORA11F-201ENST00000408237 128 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC016831.2-201ENST00000417179 352 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AL356387.2-201ENST00000422272 243 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 RBMY1KP-201ENST00000423480 476 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.72□□□□□ -1.65
ERCC4Q92889 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.72□□□□□ -1.65
ERCC4Q92889 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.72□□□□□ -1.65
ERCC4Q92889 AL356010.1-201ENST00000456364 102 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.72□□□□□ -1.65
ERCC4Q92889 RPL37P6-202ENST00000464216 403 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 RN7SL481P-201ENST00000477764 299 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 CEACAMP10-202ENST00000495431 496 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AL139099.1-201ENST00000497398 403 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC068305.1-201ENST00000497406 726 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC020893.1-201ENST00000502452 580 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.72□□□□□ -1.65
ERCC4Q92889 FTH1P21-201ENST00000512179 511 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 FTH1P9-201ENST00000513251 355 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.72□□□□□ -1.65
ERCC4Q92889 RN7SKP234-201ENST00000517173 224 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms