Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 HMGB3P21-201ENST00000452483 547 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 SNRPGP9-201ENST00000456025 225 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC015724.1-201ENST00000478577 156 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC084757.1-201ENST00000559987 490 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 BNIP3P40-201ENST00000596017 556 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 BNIP3P27-201ENST00000599991 412 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AL022067.1-201ENST00000602426 454 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AL160237.3-201ENST00000604114 1013 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC018645.2-201ENST00000609151 472 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 RNU6-156P-201ENST00000621869 107 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC093875.1-201ENST00000623688 504 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC017104.5-201ENST00000637647 639 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC132825.7-201ENST00000638744 335 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 AC006927.2-201ENST00000639256 389 ntBASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHROOM3Q8TF72 RPL7P27-201ENST00000403775 720 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 RPL23AP16-201ENST00000441715 421 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 RPL39P40-201ENST00000445481 146 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 MTND1P33-201ENST00000446251 917 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC010683.1-201ENST00000473673 378 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 RNU6-1028P-201ENST00000517164 93 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 MTCO3P15-201ENST00000526563 574 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC010735.1-201ENST00000567305 1026 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 OR4K7P-201ENST00000580232 945 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 MIR4512-201ENST00000583257 77 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 BNIP3P4-201ENST00000604946 565 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 MIR4278-201ENST00000636094 69 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 U6.107-201ENST00000637108 79 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC013437.2-201ENST00000639587 677 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AL139811.1-201ENST00000424779 2299 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 RNU1-17P-201ENST00000363022 152 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 RNU6-1151P-201ENST00000384684 107 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 RNU6-321P-201ENST00000410912 106 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 RAD23BP2-201ENST00000416003 1207 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 ARF4P4-201ENST00000439608 520 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 TAF9P1-201ENST00000445421 515 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 MRPL42P4-201ENST00000453267 443 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 TAF9P2-201ENST00000454958 515 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC023050.1-201ENST00000498198 304 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC112198.4-201ENST00000515450 351 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 SUB1P3-201ENST00000564581 315 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC008507.2-201ENST00000588402 1176 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 FRG1HP-204ENST00000617940 757 ntBASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.3□□□□□ -2.04
SHROOM3Q8TF72 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 RNA5SP456-201ENST00000364002 114 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 RNU1-91P-201ENST00000364746 163 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 RNU6-1000P-201ENST00000391066 106 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 SNORA48.3-201ENST00000391081 134 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 BTBD10P2-201ENST00000404779 676 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 ELOCP11-201ENST00000436690 332 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 MTCO2P20-201ENST00000437339 673 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 OR10R1P-201ENST00000441524 1141 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 ELOCP16-201ENST00000444494 332 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 CDC42P1-201ENST00000456658 548 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AL024509.2-201ENST00000493462 493 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 SUMO2P5-201ENST00000506790 245 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 snoZ278.1-201ENST00000517059 112 ntBASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.29□□□□□ -2.04
SHROOM3Q8TF72 AC023824.3-201ENST00000569003 562 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms