Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL451086.1-201ENST00000605596 223 ntBASIC2.67□□□□□ -1.98
CCDC71LQ8N9Z2 AC012443.1-201ENST00000605605 231 ntBASIC2.67□□□□□ -1.98
CCDC71LQ8N9Z2 TUG1_1.1-201ENST00000610654 145 ntBASIC2.67□□□□□ -1.98
CCDC71LQ8N9Z2 AL596245.1-201ENST00000618994 362 ntBASIC2.67□□□□□ -1.98
CCDC71LQ8N9Z2 AC091304.6-201ENST00000619761 202 ntBASIC2.67□□□□□ -1.98
CCDC71LQ8N9Z2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC71LQ8N9Z2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CCDC71LQ8N9Z2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC71LQ8N9Z2 AL513185.3-201ENST00000433335 1300 ntBASIC2.67□□□□□ -1.98
CCDC71LQ8N9Z2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC71LQ8N9Z2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 RNA5SP119-201ENST00000362715 117 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 RNU6-777P-201ENST00000364265 104 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AL359837.1-201ENST00000381357 287 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 U8.11-201ENST00000384699 133 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 U8.12-201ENST00000384701 133 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 RNU6-253P-201ENST00000384730 105 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC119751.3-201ENST00000399720 670 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 RPL19P1-201ENST00000411635 428 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 BEND7P1-201ENST00000422058 457 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AL022400.1-201ENST00000423946 935 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 OR4K11P-201ENST00000431829 904 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC004866.2-201ENST00000438285 481 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 ATP5C1P1-201ENST00000441945 895 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 ARPC3P5-201ENST00000448802 534 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 U8.18-201ENST00000459285 133 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 RPL30P9-201ENST00000465586 330 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 FTH1P2-201ENST00000466086 412 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 RN7SKP43-201ENST00000516173 320 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC090888.2-201ENST00000559765 1144 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AL133507.1-201ENST00000605269 557 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC008147.4-201ENST00000617570 1204 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AC131159.1-201ENST00000621854 213 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 RNA5SP196-201ENST00000625967 102 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 LRRC77P-213ENST00000637727 880 ntBASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC71LQ8N9Z2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
CCDC71LQ8N9Z2 Z83843.1-201ENST00000604070 3685 ntBASIC2.65□□□□□ -1.98
CCDC71LQ8N9Z2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CCDC71LQ8N9Z2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 Y_RNA.234-201ENST00000364409 97 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 AC068538.1-201ENST00000376856 336 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 AL136372.1-201ENST00000403060 228 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 RNU2-43P-201ENST00000410306 190 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 RNA5SP274-201ENST00000410484 108 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 RPS15AP38-201ENST00000413110 372 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 RPL21P32-201ENST00000419877 477 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 AL139281.1-201ENST00000422120 335 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 TXNL1P1-201ENST00000429528 554 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 AL117351.1-201ENST00000438864 766 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 AL591503.2-201ENST00000442314 1005 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 COX6CP2-201ENST00000444980 225 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 MTND1P31-201ENST00000449206 961 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 USP9YP10-201ENST00000454868 628 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 RNA5SP310-201ENST00000459084 116 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 AC004263.1-201ENST00000479327 332 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 AC009901.1-201ENST00000506703 541 ntBASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC71LQ8N9Z2 NPM1P41-201ENST00000512920 831 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms