Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNU6-1227P-201ENST00000383981 107 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 SNORA9-201ENST00000384215 133 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 MIR30B-201ENST00000384850 88 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 MRPL42P2-201ENST00000403169 426 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AL354719.1-201ENST00000406535 843 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 SNORA57.3-201ENST00000411095 141 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 EIF4EP1-201ENST00000422311 642 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 RPS26P56-201ENST00000444468 240 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AC005297.2-201ENST00000450430 606 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AC104164.2-201ENST00000496953 495 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 PCBP2P3-201ENST00000509726 843 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AC093677.1-201ENST00000514414 678 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AP000889.1-201ENST00000530968 660 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 MTCO3P13-201ENST00000577757 781 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 VN1R80P-201ENST00000597126 338 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 SRGNP1-201ENST00000603392 451 ntBASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A3Q8N4M1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 SNORA51.2-201ENST00000364595 132 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 SNORA20.2-201ENST00000383922 131 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-456P-201ENST00000384493 107 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-692P-201ENST00000384496 107 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AL024474.1-201ENST00000404655 591 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 SNORA11.2-201ENST00000408318 127 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 RN7SKP156-201ENST00000410308 342 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-1068P-201ENST00000410958 103 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC092832.1-201ENST00000422934 400 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC091390.3-201ENST00000426478 338 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 RPS26P47-201ENST00000427219 348 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC091286.1-201ENST00000431233 461 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 TBCAP1-201ENST00000436520 327 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 MTCYBP6-201ENST00000441810 138 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 RPS20P32-201ENST00000456044 356 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC117522.3-201ENST00000507974 584 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 TXNP6-201ENST00000510190 310 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC078814.3-201ENST00000553036 491 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AL356432.3-201ENST00000568952 465 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 DISC2.1-201ENST00000612827 205 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC012314.7-201ENST00000619693 93 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC090574.1-201ENST00000623186 233 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC055839.1-201ENST00000634467 498 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC009093.8-201ENST00000641769 292 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 AC092125.1-201ENST00000562568 1995 ntBASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SLC44A3Q8N4M1 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AL356489.2-201ENST00000566968 3528 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 MIR483-201ENST00000385070 76 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 LAP3P1-201ENST00000403648 294 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 MIR1302-11-201ENST00000408051 138 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 MIR1302-9-201ENST00000408365 138 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 308.4 ms