Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC090578.1-201ENST00000604955 591 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 NDUFA8P1-201ENST00000605525 367 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC090425.2-201ENST00000608818 501 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC103710.1-201ENST00000610003 901 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 BX664608.1-201ENST00000610519 487 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 uc_338.32-201ENST00000615087 172 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC244258.1-201ENST00000637553 1071 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 IPO8P1-201ENST00000455509 3109 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC106871.1-201ENST00000568324 3102 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 FARSBP1-201ENST00000435808 1778 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AL157700.1-201ENST00000561973 1432 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 RNU1-18P-201ENST00000363062 164 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 MIR135A2-201ENST00000384854 100 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 HMGN2P8-201ENST00000391458 268 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 MRPL42P2-201ENST00000403169 426 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 HMGB3P23-201ENST00000414981 585 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 YME1L1P1-201ENST00000429435 297 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 USP9YP14-201ENST00000430663 563 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 RABEPKP1-201ENST00000440529 1026 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 CDC42P4-201ENST00000510507 563 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC026726.1-201ENST00000512859 601 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 RN7SKP298-201ENST00000515950 94 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 SNORA31.20-201ENST00000517111 133 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 HMGN1P28-201ENST00000521340 364 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 MTCYBP41-201ENST00000528913 1123 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 CBX3P5-201ENST00000552017 521 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC087481.2-201ENST00000565492 330 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 HMGN1P30-201ENST00000589286 268 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC146944.4-201ENST00000602697 718 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC078795.2-201ENST00000602835 1252 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 Z99129.1-201ENST00000612510 255 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AL589743.7-201ENST00000612637 233 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 MIR6130-201ENST00000619419 109 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC244100.1-202ENST00000621554 382 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC112204.3-201ENST00000623822 332 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AC009093.8-201ENST00000641769 292 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AL021368.2-201ENST00000606125 5352 ntBASIC3.48□□□□□ -1.85
BEST3Q8N1M1 AL138713.1-201ENST00000624026 2130 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AC006504.1-201ENST00000562493 3666 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 SNORA7.2-201ENST00000364446 145 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 RNU6-637P-201ENST00000384050 107 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 RN7SKP177-201ENST00000410567 355 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 RNU2-8P-201ENST00000410727 190 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 RNU6-516P-201ENST00000411381 104 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 OR4K11P-201ENST00000431829 904 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 RPL35AP22-201ENST00000436855 335 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AC073614.1-201ENST00000438690 650 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.47□□□□□ -1.85
BEST3Q8N1M1 MTCO3P20-201ENST00000454926 688 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 TPT1P7-201ENST00000458300 517 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 KLF3P2-201ENST00000465138 268 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AP000926.1-201ENST00000479573 241 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 MTND1P3-201ENST00000484956 952 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AC078918.1-201ENST00000498515 228 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 HMGB1P22-201ENST00000505315 124 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 AC104619.4-201ENST00000510773 249 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 RAC1P2-201ENST00000511164 579 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 Y_RNA.672-201ENST00000516289 104 ntBASIC3.47□□□□□ -1.85
BEST3Q8N1M1 SNORA18.6-201ENST00000516792 115 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms