Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
HERC6Q8IVU3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4□□□□□ -1.77
HERC6Q8IVU3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HERC6Q8IVU3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4□□□□□ -1.77
HERC6Q8IVU3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4□□□□□ -1.77
HERC6Q8IVU3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4□□□□□ -1.77
HERC6Q8IVU3 U3.4-201ENST00000363352 213 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 SNORA38.1-201ENST00000364172 131 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 Y_RNA.598-201ENST00000410480 95 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 RN7SKP56-201ENST00000410513 331 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 B3GALNT1P1-201ENST00000420569 975 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4□□□□□ -1.77
HERC6Q8IVU3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4□□□□□ -1.77
HERC6Q8IVU3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4□□□□□ -1.77
HERC6Q8IVU3 VN1R108P-201ENST00000431580 830 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 OR4K11P-201ENST00000431829 904 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 KCTD9P3-201ENST00000434597 1169 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4□□□□□ -1.77
HERC6Q8IVU3 RAC1P7-201ENST00000445367 377 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4□□□□□ -1.77
HERC6Q8IVU3 AL590365.1-201ENST00000450788 243 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 RBMY2UP-201ENST00000453474 324 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 DCLRE1CP1-201ENST00000454630 470 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 DNAJC19P1-201ENST00000455312 319 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 AC099563.1-201ENST00000456086 418 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 VN1R17P-201ENST00000472048 1090 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 AC068724.1-201ENST00000487100 792 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 RAC1P2-201ENST00000511164 579 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4□□□□□ -1.77
HERC6Q8IVU3 MTCO3P28-201ENST00000513351 515 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 RANP9-201ENST00000519957 271 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4□□□□□ -1.77
HERC6Q8IVU3 SNRPGP16-201ENST00000533275 226 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
HERC6Q8IVU3 AC011611.1-201ENST00000552179 197 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4□□□□□ -1.77
HERC6Q8IVU3 NDUFAF4P1-201ENST00000559425 519 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4□□□□□ -1.77
HERC6Q8IVU3 AC012065.4-201ENST00000602445 679 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4□□□□□ -1.77
HERC6Q8IVU3 AC135507.1-201ENST00000607214 561 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 AC245008.1-201ENST00000608123 476 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 AC004908.2-201ENST00000609090 574 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4□□□□□ -1.77
HERC6Q8IVU3 AL355810.1-201ENST00000614629 552 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 MIR8057-201ENST00000620957 69 ntBASIC4□□□□□ -1.77
HERC6Q8IVU3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4□□□□□ -1.77
HERC6Q8IVU3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HERC6Q8IVU3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4□□□□□ -1.77
HERC6Q8IVU3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4□□□□□ -1.77
HERC6Q8IVU3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4□□□□□ -1.77
HERC6Q8IVU3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4□□□□□ -1.77
HERC6Q8IVU3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 RNU6-432P-201ENST00000384196 109 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 RNU6-278P-201ENST00000390945 109 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AL122016.1-201ENST00000403365 367 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AL138878.1-201ENST00000405131 347 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC005300.1-201ENST00000428401 373 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 SNORA71B-202ENST00000439232 272 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC092451.1-201ENST00000480211 153 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC082651.2-201ENST00000496833 166 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC080014.1-201ENST00000496877 1201 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC004069.2-201ENST00000505438 1114 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 FABP5P5-201ENST00000515537 406 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 RNU6-201P-201ENST00000517100 61 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC009101.1-201ENST00000568135 242 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 MIR3690-201ENST00000580266 75 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC006077.1-201ENST00000604746 343 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC121334.2-201ENST00000605387 271 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 YPEL5P2-201ENST00000605553 359 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC012443.1-201ENST00000605605 231 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 MIR486-1-201ENST00000612171 68 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC079684.1-201ENST00000621405 437 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 AC010149.2-201ENST00000637608 315 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 BDP1P-201ENST00000582658 1990 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 DDX10P1-201ENST00000448545 1933 ntBASIC3.99□□□□□ -1.77
HERC6Q8IVU3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HERC6Q8IVU3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERC6Q8IVU3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms