Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RNU6-882P-201ENST00000391025 103 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 RNA5SP492-201ENST00000411330 114 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 MRPS36P1-201ENST00000421291 307 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 EZH2P1-201ENST00000431167 291 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 SNRPEP4-201ENST00000435815 279 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AL513043.1-201ENST00000439124 535 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 OR6K5P-201ENST00000447050 945 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC108734.3-201ENST00000481241 1165 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC103975.1-201ENST00000482506 483 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC069528.1-202ENST00000482888 637 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC114322.1-201ENST00000506771 926 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 HMGB1P28-201ENST00000507778 552 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC091826.1-201ENST00000514065 313 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 SNORA31.1-201ENST00000515993 133 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 SNORA31.5-201ENST00000516190 133 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 SCARNA13-201ENST00000516672 275 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC091163.3-201ENST00000518269 1144 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 ERHP1-201ENST00000523006 310 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 LRRC6P1-201ENST00000532188 885 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 MIR3944-201ENST00000581277 108 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 MIR4637-201ENST00000582405 84 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 MIR3605-201ENST00000583214 100 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC091057.2-201ENST00000602594 792 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC012443.1-201ENST00000605605 231 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC096577.2-201ENST00000611455 153 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 AC004808.1-201ENST00000627671 721 ntBASIC2.92□□□□□ -1.94
CCDC50Q8IVM0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 MIR6073-201ENST00000352083 89 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 MIR26A1-201ENST00000362205 77 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 SNORD46.1-201ENST00000364139 104 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 Y_RNA.548-201ENST00000384656 105 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 RPL23AP74-201ENST00000437246 471 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 MTCYBP34-201ENST00000439552 670 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AL359385.1-201ENST00000456509 365 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AC079203.1-201ENST00000487972 404 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 RPL21P131-201ENST00000497298 483 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 SNORA70.16-201ENST00000516390 95 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AC090136.1-201ENST00000520009 240 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AC009570.1-201ENST00000609599 745 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AC024257.5-201ENST00000612739 531 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AC025588.4-201ENST00000615802 908 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 AC096644.4-201ENST00000563417 2912 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 ZNF271P-202ENST00000465539 1970 ntBASIC2.91□□□□□ -1.94
CCDC50Q8IVM0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.9□□□□□ -1.94
CCDC50Q8IVM0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.9□□□□□ -1.94
CCDC50Q8IVM0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC50Q8IVM0 RNU4-51P-201ENST00000364206 140 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 RNA5SP38-201ENST00000410750 119 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AL592148.1-201ENST00000413568 445 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AL137014.1-201ENST00000420490 1226 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 RPL35AP12-201ENST00000425362 338 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AL451062.2-201ENST00000427515 271 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC004866.2-201ENST00000438285 481 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AL109741.2-201ENST00000455561 343 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 SUMO2P2-201ENST00000456482 255 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 RPS29P26-201ENST00000477483 171 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC090453.1-201ENST00000495560 436 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC096571.1-202ENST00000506634 735 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC008837.2-201ENST00000513076 418 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC093677.1-201ENST00000514414 678 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 RNY4P37-201ENST00000516225 96 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 RN7SKP57-201ENST00000517248 293 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 SLC2A13P1-201ENST00000531560 322 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC022080.3-201ENST00000544433 482 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 HIGD1AP17-201ENST00000554576 276 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AL355836.1-201ENST00000555951 870 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AC015688.2-201ENST00000584523 262 ntBASIC2.9□□□□□ -1.95
CCDC50Q8IVM0 AL390838.2-201ENST00000602394 274 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms