Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC008250.2-201ENST00000615261 205 ntBASIC3.8□□□□□ -1.8
LRRTM4Q86VH4 SNHG22-203ENST00000617833 660 ntBASIC3.8□□□□□ -1.8
LRRTM4Q86VH4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LRRTM4Q86VH4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRTM4Q86VH4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRTM4Q86VH4 CUL1P1-201ENST00000509510 2425 ntBASIC3.8□□□□□ -1.8
LRRTM4Q86VH4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRTM4Q86VH4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRTM4Q86VH4 AP004289.2-201ENST00000444413 1457 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 RNU1-39P-201ENST00000383897 165 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 U1.1-201ENST00000384101 164 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 RPL32P23-201ENST00000397237 405 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 RN7SKP156-201ENST00000410308 342 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 RNU2-8P-201ENST00000410727 190 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 CYCSP19-201ENST00000411715 316 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AMD1P2-201ENST00000412936 992 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC087650.1-201ENST00000431445 468 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC093156.1-201ENST00000440382 670 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC073387.1-201ENST00000453261 709 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 CFTRP1-201ENST00000456646 183 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 RNU6-956P-201ENST00000458868 103 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 RPL31P60-201ENST00000478450 367 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC025445.1-201ENST00000502728 300 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC117522.2-201ENST00000510049 657 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC026726.1-201ENST00000512859 601 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AP000873.5-201ENST00000533906 236 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC123904.3-201ENST00000547218 814 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC093012.1-202ENST00000549403 582 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC124947.2-202ENST00000552735 133 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 MIR3682-201ENST00000581338 84 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC005771.1-201ENST00000585581 349 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC009977.1-201ENST00000586015 570 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC002076.2-201ENST00000617362 122 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 AC099654.13-201ENST00000639774 207 ntBASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRTM4Q86VH4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 RNY4P16-201ENST00000364768 94 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 SNORA40.3-201ENST00000390964 122 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 RNA5SP306-201ENST00000411087 107 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 SNORA57.3-201ENST00000411095 141 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 JKAMPP1-201ENST00000413804 919 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 BX842559.1-201ENST00000419615 532 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AC011742.1-201ENST00000431448 434 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AC119618.1-201ENST00000434191 222 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 SNRPEP4-201ENST00000435815 279 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 Z74696.2-201ENST00000436514 498 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 MTCO2P16-201ENST00000436962 677 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AC122718.1-201ENST00000439448 744 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AL353748.1-201ENST00000440753 474 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 ST13P20-201ENST00000447996 1065 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AL451050.1-201ENST00000450126 415 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 SSXP4-201ENST00000451349 245 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AL033528.1-201ENST00000453780 140 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 RPS20P20-201ENST00000460498 340 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 FAM133DP-201ENST00000464802 691 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AC007537.2-201ENST00000472093 511 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 RNU6-1256P-201ENST00000516539 103 ntBASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRTM4Q86VH4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms