Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 SNAP23P1-201ENST00000433229 246 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 BX276092.4-201ENST00000452056 248 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 FABP5P13-201ENST00000452144 328 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 HMGB3P21-201ENST00000452483 547 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 RPS27AP1-201ENST00000475545 471 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 RN7SL432P-201ENST00000484057 298 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 HMGB1P30-201ENST00000492455 606 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 RNU6-1016P-201ENST00000516689 94 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 RNU6-685P-201ENST00000517088 95 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 HMGN1P28-201ENST00000521340 364 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 HMGN2P6-201ENST00000551091 273 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AC013244.1-201ENST00000604279 193 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AL354984.3-201ENST00000604803 325 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AC006157.1-201ENST00000611750 366 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AC011890.2-201ENST00000613393 294 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 PISRT1.1-201ENST00000616930 107 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AL162373.1-201ENST00000620433 407 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AL732372.2-225ENST00000642124 456 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AC009229.4-201ENST00000623854 1947 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 CDC27P3-201ENST00000635418 1910 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AC009643.2-201ENST00000603543 1448 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 RNU6-1284P-201ENST00000363701 100 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 SMIM11P1-201ENST00000369586 178 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 RNU6-26P-201ENST00000383985 107 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 Y_RNA.463-201ENST00000384271 102 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 RNU1-106P-201ENST00000384382 164 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 MIR105-2-201ENST00000385083 81 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 MIR195-201ENST00000385194 87 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 SNORD70.1-201ENST00000391007 85 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 RNU6-754P-201ENST00000391166 107 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 SPTLC1P2-201ENST00000407089 121 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 RNA5SP146-201ENST00000410743 123 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 RN7SKP58-201ENST00000411010 305 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 DPPA2P3-201ENST00000411853 655 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 HMGB3P2-201ENST00000411913 584 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AC114482.1-201ENST00000418010 247 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 CALM2P2-201ENST00000428512 440 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 CBX3P6-201ENST00000430257 527 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 KNOP1P3-201ENST00000446933 426 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AP002812.1-201ENST00000495378 474 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 RN7SKP277-201ENST00000516895 283 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 RNU6-794P-201ENST00000517261 64 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AC134698.5-201ENST00000519444 336 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AC011373.1-201ENST00000607270 237 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 U2.17-201ENST00000611454 95 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 ATP5A1P2-202ENST00000616464 443 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 Z69720.2-201ENST00000624755 279 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF111Q6ZNA4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC093775.1-201ENST00000624154 1868 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 RNU1-94P-201ENST00000362627 173 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 RNU6-593P-201ENST00000364716 112 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 MT-TC-201ENST00000387405 66 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 SNORA16.2-201ENST00000390991 127 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 MIR1302-3-201ENST00000408128 138 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 RPL23AP27-201ENST00000415161 451 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 ATG3P1-201ENST00000419507 911 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AL590632.1-201ENST00000424289 371 ntBASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF111Q6ZNA4 AC096644.2-201ENST00000429278 159 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms