Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 RPL31P20-201ENST00000449593 360 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 AP002345.1-201ENST00000456493 928 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 RPL5P13-201ENST00000462840 709 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 RPL23AP42-201ENST00000471152 471 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 OR52A4P-203ENST00000498233 1014 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 RNU6-237P-201ENST00000515985 71 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 ERHP1-201ENST00000523006 310 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 AC011472.4-201ENST00000615848 491 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 U73479.1-201ENST00000618062 168 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 AL049737.1-201ENST00000413920 1403 ntBASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC171Q6TFL3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 FAM133CP-201ENST00000332869 704 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 RN7SKP226-201ENST00000364912 300 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 SUMO2P12-201ENST00000405924 140 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 RNU4-72P-201ENST00000410754 173 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AL513331.1-201ENST00000411908 397 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 RPL17P12-201ENST00000413391 526 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AL606495.1-201ENST00000422100 813 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 MED6P1-201ENST00000439659 713 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 Z77249.1-201ENST00000444622 1175 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 RPL23AP70-201ENST00000483361 460 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 ANP32BP3-201ENST00000559213 706 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 RPS15AP11-201ENST00000594193 385 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AC009318.2-201ENST00000610917 651 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AL354950.1-201ENST00000614150 568 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 AL031601.2-202ENST00000622650 282 ntBASIC2.31□□□□□ -2.04
CCDC171Q6TFL3 ZNF37BP-203ENST00000452306 1352 ntBASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 UBE2V2P4-201ENST00000447495 259 ntBASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 AL139109.1-201ENST00000455491 297 ntBASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 SYPL1P1-201ENST00000473622 768 ntBASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 AC105914.1-201ENST00000511798 226 ntBASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 HMGN1P28-201ENST00000521340 364 ntBASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 AC018630.1-201ENST00000541376 925 ntBASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 AC092650.2-201ENST00000619984 902 ntBASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 AL359851.1-201ENST00000569460 4997 ntBASIC2.3□□□□□ -2.04
CCDC171Q6TFL3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 RNU6-76P-201ENST00000384060 104 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 RNU1-52P-201ENST00000384190 164 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 RNU2-20P-201ENST00000410425 191 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 RPS27P21-201ENST00000486977 252 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 AC022493.1-201ENST00000492984 337 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 MTND4P2-201ENST00000507767 1203 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 NDUFS5P6-201ENST00000529136 295 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 AC009127.3-201ENST00000570531 403 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 AC008739.2-201ENST00000597006 317 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 AL109809.4-201ENST00000603520 2185 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 AC025754.2-201ENST00000606491 432 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 AC098657.3-201ENST00000620434 263 ntBASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC171Q6TFL3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 AL355497.1-201ENST00000406262 551 ntBASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 RN7SL274P-201ENST00000492268 272 ntBASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 AC008427.1-201ENST00000503102 655 ntBASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 U73023.1-201ENST00000603134 700 ntBASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 AC090525.3-201ENST00000605601 189 ntBASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 AC245884.12-201ENST00000615364 59 ntBASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC171Q6TFL3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC171Q6TFL3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CCDC171Q6TFL3 AL356292.1-201ENST00000283110 373 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms