Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC124068.1-201ENST00000563131 678 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 MIR4680-201ENST00000580906 66 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 U4.1-201ENST00000620349 87 ntBASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNKSR3Q6P9H4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CNKSR3Q6P9H4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CNKSR3Q6P9H4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CNKSR3Q6P9H4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CNKSR3Q6P9H4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.84□□□□□ -1.64
CNKSR3Q6P9H4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 OR51H2P-202ENST00000641424 3046 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 PCAT14-202ENST00000627127 3935 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 MAPK10-304ENST00000641341 3984 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 MIR372-201ENST00000362225 67 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 Y_RNA.112-201ENST00000363250 102 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-921P-201ENST00000384361 107 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 MIR649-201ENST00000384843 97 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 SNORD37.1-201ENST00000390968 65 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 EIF5P1-201ENST00000400019 1231 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 MIR548K-201ENST00000408406 116 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 MIR548F5-201ENST00000408421 86 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 RPS12P24-201ENST00000412619 387 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AC092832.1-201ENST00000422934 400 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AL138785.1-201ENST00000425821 331 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 HMGN2P27-201ENST00000427352 270 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AC245028.2-201ENST00000458673 253 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 RNU7-66P-201ENST00000459469 62 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AC022034.3-201ENST00000471393 478 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AL132838.2-201ENST00000492041 314 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AC008958.1-201ENST00000511047 682 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AC026782.1-201ENST00000512952 449 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-864P-201ENST00000516256 108 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-1088P-201ENST00000516850 104 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 LSM6P2-201ENST00000552208 177 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 MIR3942-201ENST00000585264 109 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AL109918.3-201ENST00000603072 338 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AC079587.1-201ENST00000603846 277 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 MIR6891-201ENST00000618788 93 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 AC112484.5-201ENST00000624189 228 ntBASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNKSR3Q6P9H4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 U3.12-201ENST00000364498 214 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 Y_RNA.367-201ENST00000365544 101 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 RNA5SP283-201ENST00000365604 119 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-1222P-201ENST00000384615 107 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 RN7SKP202-201ENST00000410439 330 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 RNU2-47P-201ENST00000410649 186 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 Y_RNA.618-201ENST00000410949 107 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-370P-201ENST00000411008 104 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 AL139095.3-201ENST00000419672 1203 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 RPL7L1P10-201ENST00000427790 463 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 RPL23AP52-201ENST00000439311 478 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 HMGB3P11-201ENST00000440127 604 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 CECR9-201ENST00000453421 199 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 BTF3P15-201ENST00000455606 336 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 AC104563.1-201ENST00000476147 376 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 SNORD27.1-201ENST00000516319 72 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 MYL12AP1-201ENST00000518490 515 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 AC103843.2-201ENST00000530523 682 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 BPIFA4P-203ENST00000603168 689 ntBASIC4.82□□□□□ -1.64
CNKSR3Q6P9H4 AC113194.1-201ENST00000606037 500 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms