Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC123786.2-201ENST00000603459 275 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AC007179.3-201ENST00000604976 235 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.66□□□□□ -1.66
KRT40Q6A162 AL121772.2-201ENST00000614331 297 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AC123768.4-201ENST00000616244 701 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AC006504.8-201ENST00000621046 635 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 YWHAEP7-203ENST00000622054 312 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AL357559.1-201ENST00000622228 274 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AC112487.2-201ENST00000637950 304 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRT40Q6A162 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
KRT40Q6A162 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRT40Q6A162 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRT40Q6A162 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.65□□□□□ -1.66
KRT40Q6A162 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRT40Q6A162 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.65□□□□□ -1.66
KRT40Q6A162 NMD3P1-201ENST00000439704 1488 ntBASIC4.65□□□□□ -1.66
KRT40Q6A162 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRT40Q6A162 SNORA60-201ENST00000362396 134 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 Y_RNA.86-201ENST00000363020 111 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 RNU6-1322P-201ENST00000364309 107 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 RNU6-1011P-201ENST00000384668 107 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.65□□□□□ -1.67
KRT40Q6A162 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 MTATP6P18-201ENST00000417994 673 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 AC068533.1-201ENST00000418542 415 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 SDCBPP3-201ENST00000419629 891 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 SNRPEP10-201ENST00000420249 274 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.65□□□□□ -1.67
KRT40Q6A162 RWDD4P2-201ENST00000426392 563 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 AL590233.1-201ENST00000430017 456 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 snoU13.7-201ENST00000459220 104 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 AC139783.2-201ENST00000504847 1145 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 AC022616.3-201ENST00000523940 148 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 OR8L1P-201ENST00000534005 955 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRT40Q6A162 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.65□□□□□ -1.67
KRT40Q6A162 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.65□□□□□ -1.67
KRT40Q6A162 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 AL356432.3-201ENST00000568952 465 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 AC099489.2-201ENST00000574976 260 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 AC110743.1-201ENST00000584870 478 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRT40Q6A162 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.65□□□□□ -1.67
KRT40Q6A162 AC025449.1-201ENST00000603896 529 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 AL136363.1-201ENST00000605349 337 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
KRT40Q6A162 AC079597.1-201ENST00000624306 508 ntBASIC4.65□□□□□ -1.67
KRT40Q6A162 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRT40Q6A162 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRT40Q6A162 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRT40Q6A162 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.65□□□□□ -1.67
KRT40Q6A162 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRT40Q6A162 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
KRT40Q6A162 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
KRT40Q6A162 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
KRT40Q6A162 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRT40Q6A162 AC032011.1-201ENST00000611703 1549 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 RNU6-169P-201ENST00000365336 107 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRT40Q6A162 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRT40Q6A162 Y_RNA.481-201ENST00000384373 102 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 Y_RNA.548-201ENST00000384656 105 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 MT-TD-201ENST00000387419 68 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 MRPL42P2-201ENST00000403169 426 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 RNU2-8P-201ENST00000410727 190 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 OR9R1P-201ENST00000412200 877 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.64□□□□□ -1.67
KRT40Q6A162 AC004552.1-201ENST00000419089 348 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 RPL31P45-201ENST00000419532 356 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.64□□□□□ -1.67
KRT40Q6A162 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.64□□□□□ -1.67
KRT40Q6A162 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.64□□□□□ -1.67
KRT40Q6A162 HMGB3P12-201ENST00000438745 556 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC092013.1-201ENST00000438795 332 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 CALM1P1-201ENST00000442082 433 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AL136380.1-201ENST00000447970 162 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.64□□□□□ -1.67
KRT40Q6A162 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.64□□□□□ -1.67
KRT40Q6A162 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.64□□□□□ -1.67
KRT40Q6A162 RPS26P3-201ENST00000470205 348 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC083798.1-201ENST00000472671 131 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 RN7SL809P-201ENST00000482040 297 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC090543.2-201ENST00000483963 348 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC004057.1-201ENST00000485827 348 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC079382.1-201ENST00000493346 557 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.64□□□□□ -1.67
KRT40Q6A162 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.64□□□□□ -1.67
KRT40Q6A162 TXNP6-201ENST00000510190 310 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 LRRC34P2-201ENST00000514850 553 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms