Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SNORA25.15-201ENST00000516487 89 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AC022634.1-201ENST00000520765 532 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AC084851.1-201ENST00000529105 249 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AC103987.3-201ENST00000582071 292 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 RPS15AP17-201ENST00000470598 390 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 FABP5P6-201ENST00000510588 409 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AC121758.2-201ENST00000553271 193 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AC024614.2-201ENST00000577584 372 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 MTCO1P4-201ENST00000520516 1409 ntBASIC1.1□□□□□ -2.23
VPS13DQ5THJ4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 AC109486.1-201ENST00000486833 374 ntBASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 RPL23AP78-201ENST00000599928 470 ntBASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 AL035411.2-201ENST00000604022 421 ntBASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 RNU6-603P-201ENST00000411403 107 ntBASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 RPS4XP11-201ENST00000446897 772 ntBASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 MIR4452-201ENST00000583004 71 ntBASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 AL359740.1-201ENST00000624340 592 ntBASIC1.09□□□□□ -2.23
VPS13DQ5THJ4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.09□□□□□ -2.24
VPS13DQ5THJ4 PAICSP7-201ENST00000419829 962 ntBASIC1.09□□□□□ -2.24
VPS13DQ5THJ4 AL354695.1-201ENST00000427935 228 ntBASIC1.09□□□□□ -2.24
VPS13DQ5THJ4 GTF2IP7-202ENST00000436677 309 ntBASIC1.09□□□□□ -2.24
VPS13DQ5THJ4 AC006499.2-201ENST00000513470 337 ntBASIC1.09□□□□□ -2.24
VPS13DQ5THJ4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.09□□□□□ -2.24
VPS13DQ5THJ4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.09□□□□□ -2.24
VPS13DQ5THJ4 MIR1323-201ENST00000408090 73 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC009965.2-201ENST00000425328 970 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 RN7SL274P-201ENST00000492268 272 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC012170.1-201ENST00000495139 359 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 RNU1-42P-201ENST00000364033 160 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 RNU6-342P-201ENST00000384521 104 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 FNDC3CP-201ENST00000420795 1155 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 MED6P1-201ENST00000439659 713 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 PSMA3P-201ENST00000555485 635 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC012493.3-201ENST00000604494 112 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC018754.1-201ENST00000607486 925 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC010678.1-201ENST00000614118 713 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 SNORA7.1-201ENST00000363750 139 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC012181.1-201ENST00000479895 423 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AL133393.1-201ENST00000603277 287 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC126118.1-201ENST00000607744 628 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 RNU4-13P-201ENST00000364019 141 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 MTND2P29-201ENST00000438595 412 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 PRELID2P1-201ENST00000552837 301 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC124283.4-201ENST00000581815 456 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AL159169.2-201ENST00000610061 1269 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 MIR3199-2-201ENST00000636243 86 ntBASIC1.08□□□□□ -2.24
VPS13DQ5THJ4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 BNIP3P2-201ENST00000441221 577 ntBASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 AC011890.2-201ENST00000613393 294 ntBASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 AC090617.7-201ENST00000623952 126 ntBASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 AC090515.1-201ENST00000465295 476 ntBASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 AC080100.1-201ENST00000624239 5356 ntBASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 AL157827.1-201ENST00000447622 132 ntBASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 HMGN1P7-201ENST00000491722 313 ntBASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
VPS13DQ5THJ4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 BX510359.4-201ENST00000423750 193 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 snoU109.4-201ENST00000458953 143 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 RPS29P20-201ENST00000489592 171 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 RNA5SP220-201ENST00000516298 104 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms