Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ZNF965P-201ENST00000432501 817 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 RPS15AP36-201ENST00000492022 382 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 AC147055.1-201ENST00000509261 750 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 GLUD1P4-201ENST00000590914 418 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 PNPT1P2-201ENST00000456768 2050 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 AL592437.2-201ENST00000421655 2434 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 Y_RNA.288-201ENST00000364854 92 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC019070.1-201ENST00000415008 1024 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 HMGB3P8-201ENST00000449709 577 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 SSXP1-201ENST00000453640 473 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC103975.1-201ENST00000482506 483 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC093331.1-201ENST00000521474 169 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 ARPC3P1-201ENST00000437218 533 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 OR7K1P-201ENST00000546439 926 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AL157834.3-201ENST00000615543 103 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 RNU6-288P-201ENST00000363690 104 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 RNU6-805P-201ENST00000365643 106 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 MED14P1-201ENST00000430517 648 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC004263.1-201ENST00000479327 332 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AP001486.2-201ENST00000561652 5113 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 MTND4P31-201ENST00000425607 1343 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 RAD1P1-201ENST00000231383 813 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 Y_RNA.228-201ENST00000364346 98 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 RNY4P7-201ENST00000364600 96 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 SNORD114-15-201ENST00000364687 72 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 AC233728.2-201ENST00000425348 757 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 PPIAP17-201ENST00000438507 471 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 SNRPFP3-201ENST00000457792 225 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 ARL4AP2-201ENST00000507378 601 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 MIR2114-201ENST00000516645 80 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.07□□□□□ -2.24
UBR4Q5T4S7 MIR6759-201ENST00000638110 65 ntBASIC1.07□□□□□ -2.24
UBR4Q5T4S7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 RNY4P24-201ENST00000362735 96 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 GAS5-AS1-201ENST00000602767 694 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AL020991.1-201ENST00000612314 373 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 RPL36AP6-201ENST00000435770 321 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 CACYBPP1-201ENST00000438592 684 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 RPL21P71-201ENST00000465598 459 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AC019176.1-201ENST00000518519 225 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AC090281.1-201ENST00000523019 276 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 CBX3P4-201ENST00000538909 354 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 RPS20P25-201ENST00000412447 352 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 GSTA11P-201ENST00000452866 669 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AC093752.1-206ENST00000511823 336 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 HMGB1P19-201ENST00000517578 577 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AL161670.1-201ENST00000554348 137 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AC244035.1-201ENST00000430042 390 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 MTCO1P43-201ENST00000431831 488 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 COX6CP2-201ENST00000444980 225 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 COX6CP5-201ENST00000527162 228 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 AC068790.3-201ENST00000602988 553 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 HPVC1-201ENST00000629899 1198 ntBASIC1.06□□□□□ -2.24
UBR4Q5T4S7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.06□□□□□ -2.24
UBR4Q5T4S7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 MCTS2P-201ENST00000394552 546 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 RHEBP3-201ENST00000411920 351 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AL591212.2-201ENST00000433923 257 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.05□□□□□ -2.24
UBR4Q5T4S7 RN7SKP43-201ENST00000516173 320 ntBASIC1.05□□□□□ -2.24
UBR4Q5T4S7 AP001207.1-201ENST00000524051 481 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms