Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 OR1L6-202ENST00000373684 1044 ntBASIC6.4□□□□□ -1.38
VARS2Q5ST30 RNU6-20P-201ENST00000384106 107 ntBASIC6.4□□□□□ -1.38
VARS2Q5ST30 RNU6-953P-201ENST00000459154 107 ntBASIC6.4□□□□□ -1.38
VARS2Q5ST30 PPP1R11P1-201ENST00000486095 376 ntBASIC6.4□□□□□ -1.38
VARS2Q5ST30 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.4□□□□□ -1.38
VARS2Q5ST30 RNU6-567P-201ENST00000516746 107 ntBASIC6.4□□□□□ -1.38
VARS2Q5ST30 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.4□□□□□ -1.38
VARS2Q5ST30 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC6.4□□□□□ -1.38
VARS2Q5ST30 SNRPGP16-201ENST00000533275 226 ntBASIC6.4□□□□□ -1.38
VARS2Q5ST30 MIR4504-201ENST00000577413 92 ntBASIC6.4□□□□□ -1.38
VARS2Q5ST30 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.4□□□□□ -1.38
VARS2Q5ST30 AP000787.2-201ENST00000604432 568 ntBASIC6.4□□□□□ -1.38
VARS2Q5ST30 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC6.4□□□□□ -1.38
VARS2Q5ST30 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
VARS2Q5ST30 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
VARS2Q5ST30 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
VARS2Q5ST30 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VARS2Q5ST30 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.4□□□□□ -1.39
VARS2Q5ST30 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.4□□□□□ -1.39
VARS2Q5ST30 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VARS2Q5ST30 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VARS2Q5ST30 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARS2Q5ST30 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARS2Q5ST30 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VARS2Q5ST30 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARS2Q5ST30 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARS2Q5ST30 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 SELENOWP1-201ENST00000322792 252 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 Y_RNA.35-201ENST00000362601 101 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 RNU6-1272P-201ENST00000362776 107 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 RNU6-879P-201ENST00000364328 108 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 RNU6-817P-201ENST00000391083 104 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 AC069218.2-201ENST00000411665 344 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 SDHDP6-201ENST00000414693 480 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 RPL7AP25-201ENST00000423357 805 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 SNRPCP2-201ENST00000504370 475 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 RNU6-772P-201ENST00000516042 105 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 SNORD33.1-201ENST00000516213 88 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 RNU6-191P-201ENST00000516295 94 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 MIR4744-201ENST00000581563 82 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 AC008814.1-201ENST00000603797 406 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 AL670379.3-201ENST00000605040 251 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 RNA5SP440-201ENST00000612665 119 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 RMST_4.1-201ENST00000616886 107 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.39□□□□□ -1.39
VARS2Q5ST30 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARS2Q5ST30 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARS2Q5ST30 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARS2Q5ST30 ZNF204P-201ENST00000416749 2397 ntBASIC6.39□□□□□ -1.39
VARS2Q5ST30 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VARS2Q5ST30 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARS2Q5ST30 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC107021.2-201ENST00000567714 2095 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC068647.1-201ENST00000489539 2265 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 SNORD8-201ENST00000363915 110 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 SNORD116-21-201ENST00000384507 92 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 U3.29-201ENST00000391296 212 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC016739.1-201ENST00000405359 345 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 BTF3P11-201ENST00000426582 477 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 USP9YP7-201ENST00000436723 430 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC064862.4-201ENST00000442180 334 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC010655.1-201ENST00000449336 292 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 USP9YP32-201ENST00000452432 430 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 AL445665.1-202ENST00000452436 324 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 AL133445.1-201ENST00000467051 452 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 RN7SL165P-201ENST00000477476 291 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC139365.2-201ENST00000517972 253 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC119403.2-201ENST00000590960 598 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 AC062037.1-201ENST00000605302 128 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 RPL12P48-201ENST00000605620 304 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 BTBD10P1-201ENST00000549824 1352 ntBASIC6.38□□□□□ -1.39
VARS2Q5ST30 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms