Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ALFQ53S48 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.87□□□□□ -1.79
ALFQ53S48 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ALFQ53S48 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ALFQ53S48 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ALFQ53S48 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALFQ53S48 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALFQ53S48 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.86□□□□□ -1.79
ALFQ53S48 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.86□□□□□ -1.79
ALFQ53S48 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
ALFQ53S48 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ALFQ53S48 AL049641.1-201ENST00000441055 1948 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALFQ53S48 AC233263.6-201ENST00000631132 1963 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALFQ53S48 RNU5F-6P-201ENST00000362979 116 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 MIR554-201ENST00000384874 96 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 RNA5SP252-201ENST00000391131 119 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 RPL21P17-201ENST00000397467 475 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 HLFP1-201ENST00000402375 499 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 Z98941.1-201ENST00000407764 100 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALFQ53S48 AC078974.1-201ENST00000411597 223 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 RHEBP3-201ENST00000411920 351 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 MRPL50P2-201ENST00000416821 482 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 AL451054.2-201ENST00000420896 202 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.86□□□□□ -1.79
ALFQ53S48 RPL23AP69-201ENST00000431134 458 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.86□□□□□ -1.79
ALFQ53S48 SNRPGP6-201ENST00000451124 220 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.86□□□□□ -1.79
ALFQ53S48 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.86□□□□□ -1.79
ALFQ53S48 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.86□□□□□ -1.79
ALFQ53S48 AC111000.2-201ENST00000507775 550 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.86□□□□□ -1.79
ALFQ53S48 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.86□□□□□ -1.79
ALFQ53S48 AC123904.3-201ENST00000547218 814 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.86□□□□□ -1.79
ALFQ53S48 AC093012.1-202ENST00000549403 582 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.86□□□□□ -1.79
ALFQ53S48 GTF2IP22-201ENST00000554443 182 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 AL356432.3-201ENST00000568952 465 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.86□□□□□ -1.79
ALFQ53S48 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.86□□□□□ -1.79
ALFQ53S48 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.86□□□□□ -1.79
ALFQ53S48 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.86□□□□□ -1.79
ALFQ53S48 AL603755.1-201ENST00000619504 163 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 AC039056.2-201ENST00000622261 511 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 AP003485.2-201ENST00000623636 610 ntBASIC3.86□□□□□ -1.79
ALFQ53S48 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.86□□□□□ -1.79
ALFQ53S48 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALFQ53S48 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALFQ53S48 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALFQ53S48 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALFQ53S48 MFSD8-236ENST00000641509 4050 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 RNU6-553P-201ENST00000364047 96 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ALFQ53S48 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.85□□□□□ -1.79
ALFQ53S48 AL049545.1-201ENST00000401856 572 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 RPS20P2-201ENST00000402520 389 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 RNU6-920P-201ENST00000410926 92 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 RNA5SP107-201ENST00000411358 122 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 AC107081.1-201ENST00000414975 361 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 HSPE1P1-201ENST00000421494 318 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.85□□□□□ -1.79
ALFQ53S48 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.85□□□□□ -1.79
ALFQ53S48 AC092447.3-201ENST00000426027 686 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 BX890604.2-201ENST00000427883 474 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 AC007919.1-201ENST00000429380 217 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 AL365396.1-201ENST00000430854 671 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 ATP5HP2-201ENST00000433885 485 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 AC007389.2-201ENST00000434630 306 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALFQ53S48 AF228730.2-201ENST00000438784 848 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 AC005094.1-201ENST00000440420 368 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 SETD6P1-201ENST00000444575 317 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 AC034236.1-201ENST00000469891 373 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 RPS20P22-201ENST00000473700 357 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 ACTR3P3-201ENST00000480448 893 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.85□□□□□ -1.79
ALFQ53S48 AC112204.1-201ENST00000502591 103 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 RPF2P2-201ENST00000504693 896 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 AF131216.2-201ENST00000512316 564 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 RNU6-759P-201ENST00000516740 103 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.85□□□□□ -1.79
ALFQ53S48 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.85□□□□□ -1.79
ALFQ53S48 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.85□□□□□ -1.79
ALFQ53S48 HMGB1P6-201ENST00000569046 646 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 MIR5187-201ENST00000583479 76 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.85□□□□□ -1.79
ALFQ53S48 AC004696.1-201ENST00000614345 607 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 SNHG22-203ENST00000617833 660 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 AC120349.3-201ENST00000624377 529 ntBASIC3.85□□□□□ -1.79
ALFQ53S48 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.85□□□□□ -1.79
ALFQ53S48 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALFQ53S48 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALFQ53S48 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.84□□□□□ -1.79
ALFQ53S48 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ALFQ53S48 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms