Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RPL7P18-201ENST00000478965 734 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 FAM172BP-201ENST00000487497 1089 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.32□□□□□ -1.88
GABPAQ06546 AC023424.2-201ENST00000493479 777 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 KCTD9P5-201ENST00000504141 1170 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.32□□□□□ -1.88
GABPAQ06546 COX7A2P2-201ENST00000505291 250 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.32□□□□□ -1.88
GABPAQ06546 AC117522.3-201ENST00000507974 584 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.32□□□□□ -1.88
GABPAQ06546 AP001372.4-201ENST00000524889 472 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
GABPAQ06546 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.32□□□□□ -1.88
GABPAQ06546 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.32□□□□□ -1.88
GABPAQ06546 AC009712.1-201ENST00000564938 316 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.32□□□□□ -1.88
GABPAQ06546 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.32□□□□□ -1.88
GABPAQ06546 VN1R78P-201ENST00000597393 564 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.32□□□□□ -1.88
GABPAQ06546 AC010738.1-201ENST00000604970 987 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 AL158042.1-201ENST00000605338 460 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 AL355493.4-201ENST00000618530 292 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
GABPAQ06546 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
GABPAQ06546 AL049780.3-201ENST00000624612 1583 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GABPAQ06546 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
GABPAQ06546 AL079305.1-201ENST00000623159 3008 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GABPAQ06546 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GABPAQ06546 AP000776.1-201ENST00000530032 1663 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GABPAQ06546 RNU6-621P-201ENST00000364752 109 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPAQ06546 AL138827.1-201ENST00000402666 306 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 RNU2-47P-201ENST00000410649 186 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 RPS25P9-201ENST00000435591 252 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 MTCO2P20-201ENST00000437339 673 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GABPAQ06546 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPAQ06546 RN7SL75P-201ENST00000461926 281 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 AC097493.1-201ENST00000463958 372 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPAQ06546 AC021146.5-201ENST00000503544 545 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPAQ06546 AC010587.2-201ENST00000511727 448 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPAQ06546 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 AC245166.1-201ENST00000521012 253 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.31□□□□□ -1.88
GABPAQ06546 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.31□□□□□ -1.88
GABPAQ06546 FAM60DP-201ENST00000524174 632 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GABPAQ06546 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.31□□□□□ -1.88
GABPAQ06546 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPAQ06546 HMGB1P6-201ENST00000569046 646 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.31□□□□□ -1.88
GABPAQ06546 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPAQ06546 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GABPAQ06546 MIR4760-201ENST00000585040 80 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 AC061975.8-201ENST00000587058 721 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPAQ06546 AL450489.1-201ENST00000612071 468 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 AP000484.1-201ENST00000620067 1252 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 AC023510.2-201ENST00000622162 746 ntBASIC3.31□□□□□ -1.88
GABPAQ06546 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
GABPAQ06546 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
GABPAQ06546 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
GABPAQ06546 AL356473.1-201ENST00000406203 1408 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.3□□□□□ -1.88
GABPAQ06546 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 RNU6-1074P-201ENST00000383995 104 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 MIR9-1-201ENST00000385198 89 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 RPL23AP29-201ENST00000397284 453 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 RNU2-71P-201ENST00000411395 189 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 USP9YP33-201ENST00000412220 421 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.3□□□□□ -1.88
GABPAQ06546 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.3□□□□□ -1.88
GABPAQ06546 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.3□□□□□ -1.88
GABPAQ06546 AC007742.1-201ENST00000425789 329 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 AC063976.3-201ENST00000426849 329 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 USP9YP35-201ENST00000435696 412 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 ELOCP26-201ENST00000436067 329 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 MUPP-201ENST00000438111 566 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 MTND2P19-201ENST00000449129 1012 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 snoU13.4-201ENST00000458916 104 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 SNORD11.1-201ENST00000459482 85 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 AC146507.2-201ENST00000460608 476 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 RPS27P29-201ENST00000463110 252 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.3□□□□□ -1.88
GABPAQ06546 RPL31P50-201ENST00000471002 296 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 VN1R17P-201ENST00000472048 1090 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GABPAQ06546 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.3□□□□□ -1.88
GABPAQ06546 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.3□□□□□ -1.88
GABPAQ06546 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms