Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AL031679.1-201ENST00000400616 525 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 OR6C71P-201ENST00000432580 913 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 RPS15AP28-201ENST00000435088 386 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC004022.1-201ENST00000447766 1066 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC108938.1-201ENST00000451204 136 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC233982.1-201ENST00000451247 436 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 TRGVB-201ENST00000453257 471 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC008413.1-201ENST00000511864 177 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 SNORA70.16-201ENST00000516390 95 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC022634.1-201ENST00000520765 532 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 OR4V1P-201ENST00000525394 1140 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC011471.1-201ENST00000585766 187 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC006023.1-201ENST00000603944 259 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AC007998.5-201ENST00000622938 237 ntBASIC1.74□□□□□ -2.13
HIST1H1AQ02539 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.74□□□□□ -2.13
HIST1H1AQ02539 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 RNU6-386P-201ENST00000362650 107 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AL136372.1-201ENST00000403060 228 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 MYL8P-204ENST00000431574 518 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 ANKRD26P4-201ENST00000455755 950 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 RNA5SP233-201ENST00000459153 113 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC004924.1-201ENST00000480160 781 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 GZMAP1-201ENST00000503054 631 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 MRPS36P2-201ENST00000512569 299 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 RNA5SP364-201ENST00000516938 78 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC005498.1-201ENST00000592125 465 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC025588.3-201ENST00000604182 274 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC090116.1-201ENST00000615679 446 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AC025016.1-201ENST00000616746 682 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 AL162373.1-201ENST00000620433 407 ntBASIC1.73□□□□□ -2.13
HIST1H1AQ02539 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HIST1H1AQ02539 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 RN7SKP226-201ENST00000364912 300 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 RNA5SP138-201ENST00000365098 114 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 SNORA51.12-201ENST00000384448 134 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 RPS4XP8-201ENST00000402039 771 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AL591416.1-201ENST00000404015 867 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 RN7SKP140-201ENST00000411196 284 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 OR4K6P-201ENST00000416478 897 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 RPS3P1-201ENST00000456781 192 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 RNU6-717P-201ENST00000459076 104 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC126389.1-201ENST00000477436 290 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 MTCYBP17-201ENST00000503579 789 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 COL6A4P2-205ENST00000509855 506 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 MTCYBP20-201ENST00000524239 1129 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 OR5AQ1P-201ENST00000527596 927 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC074050.1-201ENST00000563247 211 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 MTCO1P40-201ENST00000574371 625 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC008749.1-201ENST00000597650 306 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AL160281.1-201ENST00000605307 311 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC026790.2-201ENST00000606282 430 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC103810.6-201ENST00000606708 136 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AP004247.3-201ENST00000608682 624 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC046143.2-201ENST00000609789 160 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AP001486.3-201ENST00000615334 372 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 uc_338.20-201ENST00000621563 178 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AL353748.2-201ENST00000622148 471 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms