Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A3Q01955 RPL12P18-201ENST00000437175 325 ntBASIC4.19□□□□□ -1.74
COL4A3Q01955 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AL133244.1-201ENST00000456007 258 ntBASIC4.19□□□□□ -1.74
COL4A3Q01955 AC007547.1-201ENST00000462177 490 ntBASIC4.19□□□□□ -1.74
COL4A3Q01955 AC130509.1-201ENST00000464158 433 ntBASIC4.19□□□□□ -1.74
COL4A3Q01955 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AC114797.1-201ENST00000514003 728 ntBASIC4.19□□□□□ -1.74
COL4A3Q01955 AC093677.1-201ENST00000514414 678 ntBASIC4.19□□□□□ -1.74
COL4A3Q01955 RNU6-1220P-201ENST00000517126 108 ntBASIC4.19□□□□□ -1.74
COL4A3Q01955 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A3Q01955 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.19□□□□□ -1.74
COL4A3Q01955 AC068714.1-201ENST00000559623 800 ntBASIC4.19□□□□□ -1.74
COL4A3Q01955 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.19□□□□□ -1.74
COL4A3Q01955 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A3Q01955 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.18□□□□□ -1.74
COL4A3Q01955 AC092447.10-201ENST00000620607 1652 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3Q01955 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3Q01955 AC233263.6-201ENST00000631132 1963 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL4A3Q01955 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.18□□□□□ -1.74
COL4A3Q01955 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3Q01955 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
COL4A3Q01955 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3Q01955 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.18□□□□□ -1.74
COL4A3Q01955 RNU6-28P-201ENST00000362378 107 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 SNORA4.3-201ENST00000365564 137 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 RNU6-474P-201ENST00000384243 107 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 MIR30B-201ENST00000384850 88 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 RNU6-1148P-201ENST00000410992 104 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.18□□□□□ -1.74
COL4A3Q01955 RPS15AP12-201ENST00000419498 388 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A3Q01955 AL049734.2-201ENST00000441066 616 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.18□□□□□ -1.74
COL4A3Q01955 RPL21P6-201ENST00000479171 504 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 AC027575.1-201ENST00000481064 460 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A3Q01955 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A3Q01955 Y_RNA.691-201ENST00000516611 103 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 RNU6-1314P-201ENST00000517139 104 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 SUB1P1-201ENST00000524415 382 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.18□□□□□ -1.74
COL4A3Q01955 SETP2-201ENST00000553886 926 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 AC026464.5-201ENST00000562497 722 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 MIR3146-201ENST00000580367 79 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 AC106900.2-201ENST00000604994 317 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 AC005000.2-201ENST00000605468 310 ntBASIC4.18□□□□□ -1.74
COL4A3Q01955 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.18□□□□□ -1.74
COL4A3Q01955 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.18□□□□□ -1.74
COL4A3Q01955 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3Q01955 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3Q01955 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3Q01955 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A3Q01955 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.18□□□□□ -1.74
COL4A3Q01955 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
COL4A3Q01955 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3Q01955 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3Q01955 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A3Q01955 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3Q01955 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
COL4A3Q01955 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
COL4A3Q01955 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3Q01955 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3Q01955 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.17□□□□□ -1.74
COL4A3Q01955 MTND5P33-201ENST00000571250 1450 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL4A3Q01955 BEND7P1-201ENST00000422058 457 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 AL139247.1-201ENST00000422768 325 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 AC096632.1-201ENST00000427395 310 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.17□□□□□ -1.74
COL4A3Q01955 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A3Q01955 RPL7P28-201ENST00000437739 740 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 GTF2IP13-201ENST00000438487 386 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 AC093156.1-201ENST00000440382 670 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 HMGB1P15-201ENST00000453854 435 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A3Q01955 AL356010.1-201ENST00000456364 102 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.17□□□□□ -1.74
COL4A3Q01955 MRPS17P3-201ENST00000465453 385 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 AC006512.1-201ENST00000468816 291 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 AL049873.1-201ENST00000480540 376 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A3Q01955 AC233702.1-201ENST00000482905 502 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 AC021146.3-201ENST00000511911 260 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 SCARNA14-201ENST00000516903 136 ntBASIC4.17□□□□□ -1.74
COL4A3Q01955 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.17□□□□□ -1.74
COL4A3Q01955 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.17□□□□□ -1.74
COL4A3Q01955 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.17□□□□□ -1.74
COL4A3Q01955 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.17□□□□□ -1.74
COL4A3Q01955 OR4T1P-201ENST00000554933 911 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms