Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.1□□□□□ -1.91
IRX3P78415 AC098483.2-201ENST00000603158 454 ntBASIC3.1□□□□□ -1.91
IRX3P78415 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.1□□□□□ -1.91
IRX3P78415 AC090115.4-201ENST00000609970 188 ntBASIC3.1□□□□□ -1.91
IRX3P78415 AC018926.1-201ENST00000616335 435 ntBASIC3.1□□□□□ -1.91
IRX3P78415 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.1□□□□□ -1.91
IRX3P78415 AL590396.4-201ENST00000636779 956 ntBASIC3.1□□□□□ -1.91
IRX3P78415 AP000526.1-201ENST00000603308 1388 ntBASIC3.1□□□□□ -1.91
IRX3P78415 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.1□□□□□ -1.91
IRX3P78415 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
IRX3P78415 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
IRX3P78415 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
IRX3P78415 RNU6-619P-201ENST00000365146 108 ntBASIC3.09□□□□□ -1.91
IRX3P78415 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
IRX3P78415 RNU6-441P-201ENST00000384545 106 ntBASIC3.09□□□□□ -1.91
IRX3P78415 SNORA1.3-201ENST00000384676 136 ntBASIC3.09□□□□□ -1.91
IRX3P78415 FAT1P1-201ENST00000406588 507 ntBASIC3.09□□□□□ -1.91
IRX3P78415 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
IRX3P78415 NPM1P11-201ENST00000417106 855 ntBASIC3.09□□□□□ -1.91
IRX3P78415 AC112220.1-201ENST00000434628 355 ntBASIC3.09□□□□□ -1.91
IRX3P78415 YWHAZP8-201ENST00000436935 731 ntBASIC3.09□□□□□ -1.91
IRX3P78415 AC004022.1-201ENST00000447766 1066 ntBASIC3.09□□□□□ -1.91
IRX3P78415 AC011753.1-201ENST00000451001 220 ntBASIC3.09□□□□□ -1.91
IRX3P78415 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.09□□□□□ -1.91
IRX3P78415 snoU13.3-201ENST00000459441 104 ntBASIC3.09□□□□□ -1.91
IRX3P78415 AC026414.1-201ENST00000504046 698 ntBASIC3.09□□□□□ -1.91
IRX3P78415 RNU6-202P-201ENST00000515998 96 ntBASIC3.09□□□□□ -1.91
IRX3P78415 RNA5SP24-201ENST00000516478 95 ntBASIC3.09□□□□□ -1.91
IRX3P78415 UBTFL10-201ENST00000528532 562 ntBASIC3.09□□□□□ -1.91
IRX3P78415 AP000790.1-201ENST00000528891 737 ntBASIC3.09□□□□□ -1.91
IRX3P78415 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
IRX3P78415 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.09□□□□□ -1.91
IRX3P78415 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.09□□□□□ -1.91
IRX3P78415 AC078880.5-201ENST00000617845 421 ntBASIC3.09□□□□□ -1.91
IRX3P78415 AL355493.4-201ENST00000618530 292 ntBASIC3.09□□□□□ -1.91
IRX3P78415 AC064859.1-201ENST00000624741 174 ntBASIC3.09□□□□□ -1.91
IRX3P78415 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.09□□□□□ -1.91
IRX3P78415 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
IRX3P78415 AC080100.1-201ENST00000624239 5356 ntBASIC3.08□□□□□ -1.92
IRX3P78415 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
IRX3P78415 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.08□□□□□ -1.92
IRX3P78415 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
IRX3P78415 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.08□□□□□ -1.92
IRX3P78415 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
IRX3P78415 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
IRX3P78415 DEFA7P-201ENST00000382676 285 ntBASIC3.08□□□□□ -1.92
IRX3P78415 AC246680.2-201ENST00000422106 389 ntBASIC3.08□□□□□ -1.92
IRX3P78415 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.08□□□□□ -1.92
IRX3P78415 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.08□□□□□ -1.92
IRX3P78415 RAB11AP1-201ENST00000442978 646 ntBASIC3.08□□□□□ -1.92
IRX3P78415 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
IRX3P78415 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.08□□□□□ -1.92
IRX3P78415 RPL7P20-201ENST00000520308 745 ntBASIC3.08□□□□□ -1.92
IRX3P78415 OR10V3P-201ENST00000525712 725 ntBASIC3.08□□□□□ -1.92
IRX3P78415 OR4R2P-201ENST00000530815 597 ntBASIC3.08□□□□□ -1.92
IRX3P78415 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.08□□□□□ -1.92
IRX3P78415 AC092470.1-201ENST00000546187 132 ntBASIC3.08□□□□□ -1.92
IRX3P78415 LSM6P2-201ENST00000552208 177 ntBASIC3.08□□□□□ -1.92
IRX3P78415 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.08□□□□□ -1.92
IRX3P78415 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.08□□□□□ -1.92
IRX3P78415 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.08□□□□□ -1.92
IRX3P78415 SNORD53-201ENST00000579969 78 ntBASIC3.08□□□□□ -1.92
IRX3P78415 AC034102.8-201ENST00000615146 484 ntBASIC3.08□□□□□ -1.92
IRX3P78415 AC092650.2-201ENST00000619984 902 ntBASIC3.08□□□□□ -1.92
IRX3P78415 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.08□□□□□ -1.92
IRX3P78415 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
IRX3P78415 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.07□□□□□ -1.92
IRX3P78415 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.07□□□□□ -1.92
IRX3P78415 SNORD62.1-201ENST00000362541 86 ntBASIC3.07□□□□□ -1.92
IRX3P78415 U6.112-201ENST00000384129 70 ntBASIC3.07□□□□□ -1.92
IRX3P78415 SNORA67.4-201ENST00000384688 142 ntBASIC3.07□□□□□ -1.92
IRX3P78415 MIR649-201ENST00000384843 97 ntBASIC3.07□□□□□ -1.92
IRX3P78415 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.07□□□□□ -1.92
IRX3P78415 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.07□□□□□ -1.92
IRX3P78415 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.07□□□□□ -1.92
IRX3P78415 AC017099.1-201ENST00000448261 1028 ntBASIC3.07□□□□□ -1.92
IRX3P78415 NAP1L1P3-201ENST00000462291 880 ntBASIC3.07□□□□□ -1.92
IRX3P78415 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
IRX3P78415 MRPL42P6-201ENST00000486397 371 ntBASIC3.07□□□□□ -1.92
IRX3P78415 KLRA1P-201ENST00000503499 986 ntBASIC3.07□□□□□ -1.92
IRX3P78415 RNU5A-7P-201ENST00000515979 116 ntBASIC3.07□□□□□ -1.92
IRX3P78415 RNU6-334P-201ENST00000517072 102 ntBASIC3.07□□□□□ -1.92
IRX3P78415 IGLV3-17-201ENST00000519099 244 ntBASIC3.07□□□□□ -1.92
IRX3P78415 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.07□□□□□ -1.92
IRX3P78415 SUB1P1-201ENST00000524415 382 ntBASIC3.07□□□□□ -1.92
IRX3P78415 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.07□□□□□ -1.92
IRX3P78415 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.07□□□□□ -1.92
IRX3P78415 AC121758.2-201ENST00000553271 193 ntBASIC3.07□□□□□ -1.92
IRX3P78415 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.07□□□□□ -1.92
IRX3P78415 AC008739.2-201ENST00000597006 317 ntBASIC3.07□□□□□ -1.92
IRX3P78415 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.07□□□□□ -1.92
IRX3P78415 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.07□□□□□ -1.92
IRX3P78415 AC092474.3-201ENST00000603022 568 ntBASIC3.07□□□□□ -1.92
IRX3P78415 MIR6895-201ENST00000613497 78 ntBASIC3.07□□□□□ -1.92
IRX3P78415 AC025034.2-201ENST00000623264 286 ntBASIC3.07□□□□□ -1.92
IRX3P78415 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.07□□□□□ -1.92
IRX3P78415 AC011460.1-201ENST00000636268 1834 ntBASIC3.07□□□□□ -1.92
IRX3P78415 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.07□□□□□ -1.92
IRX3P78415 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.06□□□□□ -1.92
IRX3P78415 AL139276.1-201ENST00000311910 1001 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms