Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.05□□□□□ -1.92
CCNA1P78396 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCNA1P78396 AC008264.2-201ENST00000610193 3731 ntBASIC3.05□□□□□ -1.92
CCNA1P78396 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCNA1P78396 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CCNA1P78396 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCNA1P78396 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCNA1P78396 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCNA1P78396 RNU6-839P-201ENST00000363347 108 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.04□□□□□ -1.92
CCNA1P78396 RNU6-1197P-201ENST00000391183 107 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AL513477.1-202ENST00000417061 214 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 NPM1P11-201ENST00000417106 855 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.04□□□□□ -1.92
CCNA1P78396 RPL21P2-201ENST00000440049 481 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.04□□□□□ -1.92
CCNA1P78396 AC010099.1-201ENST00000455434 375 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AC090525.1-201ENST00000479116 478 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.04□□□□□ -1.92
CCNA1P78396 AC118282.1-201ENST00000506408 765 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.04□□□□□ -1.92
CCNA1P78396 AC128657.1-201ENST00000549459 145 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AC125611.2-201ENST00000551907 647 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.04□□□□□ -1.92
CCNA1P78396 RN7SL622P-201ENST00000585292 275 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AC010620.2-201ENST00000600135 313 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AL031176.1-201ENST00000604554 466 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AP000254.1-201ENST00000609934 520 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 AC026241.1-201ENST00000517873 2142 ntBASIC3.04□□□□□ -1.92
CCNA1P78396 OR4G11P-202ENST00000642116 1414 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 SNORD62.1-201ENST00000362541 86 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.03□□□□□ -1.92
CCNA1P78396 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCNA1P78396 AL035405.1-201ENST00000400795 710 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 FO393413.1-201ENST00000402892 195 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNA1P78396 SFR1P2-201ENST00000421841 730 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNA1P78396 AL592447.1-201ENST00000447592 540 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.03□□□□□ -1.92
CCNA1P78396 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNA1P78396 RPL21P41-201ENST00000459863 264 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 RPL21P18-201ENST00000469899 480 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNA1P78396 RNU1-41P-201ENST00000516161 162 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 SNORA9.3-201ENST00000516383 129 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 RNU1-48P-201ENST00000516400 162 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNA1P78396 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
CCNA1P78396 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNA1P78396 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.03□□□□□ -1.92
CCNA1P78396 HSPE1P20-201ENST00000538133 289 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 SETP7-201ENST00000552169 453 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 SETP2-201ENST00000553886 926 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNA1P78396 AL020991.1-201ENST00000612314 373 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 VN1R74P-201ENST00000613259 503 ntBASIC3.03□□□□□ -1.92
CCNA1P78396 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.03□□□□□ -1.92
CCNA1P78396 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCNA1P78396 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.03□□□□□ -1.93
CCNA1P78396 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.03□□□□□ -1.93
CCNA1P78396 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CCNA1P78396 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCNA1P78396 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCNA1P78396 AC016769.3-201ENST00000396562 315 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 AL133264.1-201ENST00000407157 562 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 BMS1P22-201ENST00000414726 313 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 RPLP0P7-201ENST00000416050 667 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 RPL7L1P10-201ENST00000427790 463 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 AL512661.1-201ENST00000434586 1253 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 MUPP-201ENST00000438111 566 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNA1P78396 RAC1P7-201ENST00000445367 377 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 RNU7-140P-201ENST00000459546 60 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.02□□□□□ -1.93
CCNA1P78396 RPL30P5-201ENST00000494923 336 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 AC091860.1-201ENST00000505723 432 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 AP003122.3-201ENST00000526316 255 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.02□□□□□ -1.93
CCNA1P78396 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNA1P78396 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNA1P78396 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNA1P78396 AC007621.1-201ENST00000604544 437 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNA1P78396 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCNA1P78396 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CCNA1P78396 AC110079.1-202ENST00000635213 138 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 AC091948.2-201ENST00000636510 279 ntBASIC3.02□□□□□ -1.93
CCNA1P78396 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CCNA1P78396 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCNA1P78396 AC010680.1-201ENST00000590024 3590 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCNA1P78396 RN7SKP123-201ENST00000410732 291 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AL356320.2-201ENST00000417263 507 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 BEND7P1-201ENST00000422058 457 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AC244505.4-201ENST00000434905 287 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 MTND4P15-201ENST00000437913 1033 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms