Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL39P62891 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC0.94□□□□□ -2.26
RPL39P62891 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
RPL39P62891 HMGB3P10-201ENST00000434734 572 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AP000949.1-201ENST00000438328 629 ntBASIC0.93□□□□□ -2.26
RPL39P62891 HSPE1P24-201ENST00000450782 238 ntBASIC0.93□□□□□ -2.26
RPL39P62891 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC0.93□□□□□ -2.26
RPL39P62891 AC107398.1-201ENST00000486904 505 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AC140059.1-201ENST00000489238 361 ntBASIC0.93□□□□□ -2.26
RPL39P62891 RPL23AP55-201ENST00000498163 452 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AC021146.7-201ENST00000509604 775 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AC010486.1-201ENST00000511793 424 ntBASIC0.93□□□□□ -2.26
RPL39P62891 MRPS17P9-201ENST00000511924 393 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.93□□□□□ -2.26
RPL39P62891 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.93□□□□□ -2.26
RPL39P62891 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AC090821.2-201ENST00000523552 176 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AC008083.2-201ENST00000546707 476 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AL627230.6-201ENST00000611129 280 ntBASIC0.93□□□□□ -2.26
RPL39P62891 HMGB1P24-202ENST00000615653 685 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AL356274.1-201ENST00000617064 410 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AC091304.6-201ENST00000619761 202 ntBASIC0.93□□□□□ -2.26
RPL39P62891 MIR7843-201ENST00000622274 79 ntBASIC0.93□□□□□ -2.26
RPL39P62891 SCARNA15.3-201ENST00000626315 122 ntBASIC0.93□□□□□ -2.26
RPL39P62891 SCARNA4.1-201ENST00000628597 123 ntBASIC0.93□□□□□ -2.26
RPL39P62891 ZNF90P1-201ENST00000480493 1951 ntBASIC0.93□□□□□ -2.26
RPL39P62891 ZNF72P-201ENST00000425869 1908 ntBASIC0.93□□□□□ -2.26
RPL39P62891 AC009902.3-201ENST00000606235 2172 ntBASIC0.93□□□□□ -2.26
RPL39P62891 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
RPL39P62891 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
RPL39P62891 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
RPL39P62891 AL356292.1-201ENST00000283110 373 ntBASIC0.92□□□□□ -2.26
RPL39P62891 RNU6-60P-201ENST00000364792 103 ntBASIC0.92□□□□□ -2.26
RPL39P62891 RNU6-174P-201ENST00000410406 106 ntBASIC0.92□□□□□ -2.26
RPL39P62891 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC0.92□□□□□ -2.26
RPL39P62891 AC015922.2-201ENST00000435593 184 ntBASIC0.92□□□□□ -2.26
RPL39P62891 HMGB1P45-201ENST00000435986 653 ntBASIC0.92□□□□□ -2.26
RPL39P62891 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RPL39P62891 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
RPL39P62891 AL135752.1-201ENST00000479477 471 ntBASIC0.92□□□□□ -2.26
RPL39P62891 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.92□□□□□ -2.26
RPL39P62891 AC105252.1-201ENST00000503089 286 ntBASIC0.92□□□□□ -2.26
RPL39P62891 AC109464.2-201ENST00000510242 943 ntBASIC0.92□□□□□ -2.26
RPL39P62891 RNU6-295P-201ENST00000516901 104 ntBASIC0.92□□□□□ -2.26
RPL39P62891 ATP5F1P7-201ENST00000567330 760 ntBASIC0.92□□□□□ -2.26
RPL39P62891 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC0.92□□□□□ -2.26
RPL39P62891 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RPL39P62891 AL035411.2-201ENST00000604022 421 ntBASIC0.92□□□□□ -2.26
RPL39P62891 AL645939.4-201ENST00000604495 135 ntBASIC0.92□□□□□ -2.26
RPL39P62891 AL022099.1-201ENST00000604551 712 ntBASIC0.92□□□□□ -2.26
RPL39P62891 AL355297.2-201ENST00000604792 129 ntBASIC0.92□□□□□ -2.26
RPL39P62891 AC126118.1-201ENST00000607744 628 ntBASIC0.92□□□□□ -2.26
RPL39P62891 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.92□□□□□ -2.26
RPL39P62891 AP001486.3-201ENST00000615334 372 ntBASIC0.92□□□□□ -2.26
RPL39P62891 AC068831.7-201ENST00000616954 363 ntBASIC0.92□□□□□ -2.26
RPL39P62891 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.92□□□□□ -2.26
RPL39P62891 AL353748.2-201ENST00000622148 471 ntBASIC0.92□□□□□ -2.26
RPL39P62891 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RPL39P62891 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
RPL39P62891 AC016769.3-201ENST00000396562 315 ntBASIC0.91□□□□□ -2.26
RPL39P62891 RNU2-41P-201ENST00000410991 178 ntBASIC0.91□□□□□ -2.26
RPL39P62891 HMGB1P49-201ENST00000418882 569 ntBASIC0.91□□□□□ -2.26
RPL39P62891 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.91□□□□□ -2.26
RPL39P62891 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RPL39P62891 HMGN2P3-201ENST00000433603 273 ntBASIC0.91□□□□□ -2.26
RPL39P62891 HMGN2P5-201ENST00000436882 273 ntBASIC0.91□□□□□ -2.26
RPL39P62891 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.91□□□□□ -2.26
RPL39P62891 AC092155.2-201ENST00000454675 477 ntBASIC0.91□□□□□ -2.26
RPL39P62891 TRBV12-1-201ENST00000479785 344 ntBASIC0.91□□□□□ -2.26
RPL39P62891 AP003033.1-201ENST00000527244 415 ntBASIC0.91□□□□□ -2.26
RPL39P62891 AP004247.1-201ENST00000531556 1289 ntBASIC0.91□□□□□ -2.26
RPL39P62891 REXO2-218ENST00000544827 880 ntTSL 3 BASIC0.91□□□□□ -2.26
RPL39P62891 AC008269.2-201ENST00000561915 1105 ntBASIC0.91□□□□□ -2.26
RPL39P62891 AC023813.2-201ENST00000564321 469 ntBASIC0.91□□□□□ -2.26
RPL39P62891 MIR3683-201ENST00000580847 82 ntBASIC0.91□□□□□ -2.26
RPL39P62891 AC003001.2-201ENST00000616294 831 ntBASIC0.91□□□□□ -2.26
RPL39P62891 uc_338.9-201ENST00000617424 182 ntBASIC0.91□□□□□ -2.26
RPL39P62891 MIR6852-201ENST00000621699 66 ntBASIC0.91□□□□□ -2.26
RPL39P62891 AC068620.4-201ENST00000636730 1182 ntBASIC0.91□□□□□ -2.26
RPL39P62891 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
RPL39P62891 AC091812.1-201ENST00000432235 1948 ntBASIC0.91□□□□□ -2.26
RPL39P62891 AL356473.1-201ENST00000406203 1408 ntBASIC0.9□□□□□ -2.26
RPL39P62891 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
RPL39P62891 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
RPL39P62891 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
RPL39P62891 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
RPL39P62891 RNA5SP190-201ENST00000365222 118 ntBASIC0.9□□□□□ -2.27
RPL39P62891 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
RPL39P62891 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL39P62891 AC233728.2-201ENST00000425348 757 ntBASIC0.9□□□□□ -2.27
RPL39P62891 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.9□□□□□ -2.27
RPL39P62891 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.9□□□□□ -2.27
RPL39P62891 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL39P62891 RPS29P29-201ENST00000456396 171 ntBASIC0.9□□□□□ -2.27
RPL39P62891 MTCYBP18-201ENST00000501056 747 ntBASIC0.9□□□□□ -2.27
RPL39P62891 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL39P62891 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL39P62891 OR5BM1P-201ENST00000512021 366 ntBASIC0.9□□□□□ -2.27
RPL39P62891 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL39P62891 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms