Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN2P57739 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CLDN2P57739 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN2P57739 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN2P57739 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN2P57739 MAPK10-372ENST00000641954 3413 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN2P57739 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN2P57739 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN2P57739 AC018555.1-201ENST00000567548 1980 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN2P57739 GNG5P1-201ENST00000255500 204 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 RN7SKP44-201ENST00000363602 316 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 RNU5A-8P-201ENST00000364102 114 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
CLDN2P57739 RNU6-1074P-201ENST00000383995 104 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 MIR19A-201ENST00000384878 82 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 MIR23A-201ENST00000385245 73 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 RNU6-754P-201ENST00000391166 107 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 RNU2-43P-201ENST00000410306 190 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 RN7SKP177-201ENST00000410567 355 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 HMGB3P23-201ENST00000414981 585 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.64□□□□□ -1.83
CLDN2P57739 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN2P57739 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN2P57739 USP9YP14-201ENST00000430663 563 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 OR4K11P-201ENST00000431829 904 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN2P57739 RPL21P112-201ENST00000434403 463 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC009961.2-201ENST00000435771 251 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 FTH1P1-201ENST00000437933 532 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 ATP5C1P1-201ENST00000441945 895 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN2P57739 TPT1P14-201ENST00000448018 505 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 RPS24P6-201ENST00000452670 400 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC007967.1-201ENST00000455422 1159 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 RNU7-59P-201ENST00000459101 61 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN2P57739 HMGB1P22-201ENST00000505315 124 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN2P57739 AC026801.2-201ENST00000515352 425 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 SNORA70.18-201ENST00000516696 98 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 SNORA18.6-201ENST00000516792 115 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 MTCYBP20-201ENST00000524239 1129 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AP003392.2-201ENST00000527269 208 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN2P57739 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.64□□□□□ -1.83
CLDN2P57739 OR4T1P-201ENST00000554933 911 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC087481.2-201ENST00000565492 330 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 MIR3146-201ENST00000580367 79 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN2P57739 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN2P57739 DUXAP4-201ENST00000603046 613 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC007179.3-201ENST00000604976 235 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC091304.9-201ENST00000612091 226 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC087241.4-201ENST00000612441 480 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC090970.3-201ENST00000612566 866 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AL353748.2-201ENST00000622148 471 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC243312.2-201ENST00000623340 601 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC112204.3-201ENST00000623822 332 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AL159972.1-201ENST00000625150 448 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC084035.1-201ENST00000634543 607 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 AC138649.5-201ENST00000637456 137 ntBASIC3.64□□□□□ -1.83
CLDN2P57739 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN2P57739 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN2P57739 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLDN2P57739 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN2P57739 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CLDN2P57739 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN2P57739 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN2P57739 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN2P57739 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN2P57739 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN2P57739 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN2P57739 PNPT1P2-201ENST00000456768 2050 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN2P57739 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN2P57739 RNU6-223P-201ENST00000362830 107 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 RNA5SP167-201ENST00000365461 116 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.63□□□□□ -1.83
CLDN2P57739 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN2P57739 ZNF885P-201ENST00000420174 1098 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AC245054.1-201ENST00000420944 258 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN2P57739 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN2P57739 RPL21P23-201ENST00000446654 460 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 GAPDHP17-201ENST00000449858 1001 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AC006480.1-201ENST00000449887 378 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 CYCSP35-201ENST00000451978 304 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN2P57739 AC108059.3-201ENST00000456388 214 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 snoU13.24-201ENST00000458998 104 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN2P57739 AC010285.1-201ENST00000470580 392 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN2P57739 AP000926.1-201ENST00000479573 241 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 MTND1P3-201ENST00000484956 952 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AC069499.1-201ENST00000489433 509 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AC096751.1-202ENST00000502691 1067 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms