Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RN7SKP298-201ENST00000515950 94 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 RNA5SP309-201ENST00000516670 106 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN20P56880 MTCYBP41-201ENST00000528913 1123 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN20P56880 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN20P56880 AC123904.2-201ENST00000548059 300 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 OR4K8P-201ENST00000578842 1048 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 MIR4425-201ENST00000580572 84 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 SNORD84-203ENST00000584275 78 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 CKS1BP3-201ENST00000600888 237 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AC090578.1-201ENST00000604955 591 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AC103710.1-201ENST00000610003 901 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 BX664608.1-201ENST00000610519 487 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AL589743.7-201ENST00000612637 233 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN20P56880 AC005344.1-201ENST00000613391 459 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AC112204.3-201ENST00000623822 332 ntBASIC3.44□□□□□ -1.86
CLDN20P56880 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN20P56880 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN20P56880 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN20P56880 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN20P56880 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN20P56880 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN20P56880 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN20P56880 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
CLDN20P56880 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN20P56880 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CLDN20P56880 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CLDN20P56880 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CLDN20P56880 MIR135A2-201ENST00000384854 100 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 MIR554-201ENST00000384874 96 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AL591419.1-201ENST00000427423 339 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AC017083.1-201ENST00000428093 483 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 OR4K11P-201ENST00000431829 904 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN20P56880 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN20P56880 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN20P56880 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN20P56880 NANOGP10-201ENST00000453325 895 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AC007967.1-201ENST00000455422 1159 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 KLF3P2-201ENST00000465138 268 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AC078918.1-201ENST00000498515 228 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN20P56880 CDC42P4-201ENST00000510507 563 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 SAP18P1-201ENST00000512058 390 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN20P56880 RNU6-798P-201ENST00000516912 103 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 SNORA31.20-201ENST00000517111 133 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 MED28P5-201ENST00000528254 438 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN20P56880 AC087481.2-201ENST00000565492 330 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 MTND1P15-201ENST00000579262 949 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN20P56880 HMGN1P30-201ENST00000589286 268 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN20P56880 AC091805.2-201ENST00000603848 235 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AL136363.2-201ENST00000604173 851 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN20P56880 Z99129.1-201ENST00000612510 255 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 AC015540.1-201ENST00000615828 501 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 MIR6130-201ENST00000619419 109 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 MAPK10-372ENST00000641954 3413 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
CLDN20P56880 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.43□□□□□ -1.86
CLDN20P56880 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN20P56880 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN20P56880 AL157700.1-201ENST00000561973 1432 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 FARSBP1-201ENST00000435808 1778 ntBASIC3.43□□□□□ -1.86
CLDN20P56880 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN20P56880 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN20P56880 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN20P56880 GNG5P1-201ENST00000255500 204 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CLDN20P56880 RNU6-1074P-201ENST00000383995 104 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 RNU6-637P-201ENST00000384050 107 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 U8.11-201ENST00000384699 133 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 U8.12-201ENST00000384701 133 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 MIR19A-201ENST00000384878 82 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 SNORA11-201ENST00000408789 128 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 SNORA57.3-201ENST00000411095 141 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 HMGN1P24-201ENST00000412282 298 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms