Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC090774.1-201ENST00000435925 246 ntBASIC2.56□□□□□ -2
CLDN18P56856 AC129850.1-201ENST00000436203 508 ntBASIC2.56□□□□□ -2
CLDN18P56856 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.56□□□□□ -2
CLDN18P56856 AC105272.1-201ENST00000438604 198 ntBASIC2.56□□□□□ -2
CLDN18P56856 RPS24P13-201ENST00000442520 397 ntBASIC2.56□□□□□ -2
CLDN18P56856 AC112653.1-201ENST00000443851 386 ntBASIC2.56□□□□□ -2
CLDN18P56856 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.56□□□□□ -2
CLDN18P56856 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.56□□□□□ -2
CLDN18P56856 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.56□□□□□ -2
CLDN18P56856 GTF3AP2-201ENST00000557014 266 ntBASIC2.56□□□□□ -2
CLDN18P56856 HMGB1P14-201ENST00000557424 591 ntBASIC2.56□□□□□ -2
CLDN18P56856 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.56□□□□□ -2
CLDN18P56856 AC090888.1-201ENST00000561335 1141 ntBASIC2.56□□□□□ -2
CLDN18P56856 AC138915.2-201ENST00000569776 97 ntBASIC2.56□□□□□ -2
CLDN18P56856 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.56□□□□□ -2
CLDN18P56856 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.56□□□□□ -2
CLDN18P56856 AC006504.3-201ENST00000586818 523 ntBASIC2.56□□□□□ -2
CLDN18P56856 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.56□□□□□ -2
CLDN18P56856 AC025588.4-201ENST00000615802 908 ntBASIC2.56□□□□□ -2
CLDN18P56856 AC006213.4-201ENST00000616184 634 ntBASIC2.56□□□□□ -2
CLDN18P56856 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CLDN18P56856 AC093875.1-201ENST00000623688 504 ntBASIC2.56□□□□□ -2
CLDN18P56856 AC009039.2-201ENST00000624524 529 ntBASIC2.56□□□□□ -2
CLDN18P56856 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.56□□□□□ -2
CLDN18P56856 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.56□□□□□ -2
CLDN18P56856 AC005832.2-201ENST00000538921 1430 ntBASIC2.56□□□□□ -2
CLDN18P56856 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLDN18P56856 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CLDN18P56856 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CLDN18P56856 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.55□□□□□ -2
CLDN18P56856 RNU6-193P-201ENST00000410977 107 ntBASIC2.55□□□□□ -2
CLDN18P56856 RNA5SP492-201ENST00000411330 114 ntBASIC2.55□□□□□ -2
CLDN18P56856 BTF3P8-201ENST00000414577 526 ntBASIC2.55□□□□□ -2
CLDN18P56856 BX682237.1-201ENST00000415016 335 ntBASIC2.55□□□□□ -2
CLDN18P56856 CCDC58P2-201ENST00000417131 366 ntBASIC2.55□□□□□ -2
CLDN18P56856 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.55□□□□□ -2
CLDN18P56856 AL590233.1-201ENST00000430017 456 ntBASIC2.55□□□□□ -2
CLDN18P56856 AC092427.1-201ENST00000439177 601 ntBASIC2.55□□□□□ -2
CLDN18P56856 AC093155.1-201ENST00000440164 826 ntBASIC2.55□□□□□ -2
CLDN18P56856 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.55□□□□□ -2
CLDN18P56856 AC009237.8-201ENST00000445492 379 ntBASIC2.55□□□□□ -2
CLDN18P56856 AL096829.2-201ENST00000446582 742 ntBASIC2.55□□□□□ -2
CLDN18P56856 MTND2P24-201ENST00000453434 806 ntBASIC2.55□□□□□ -2
CLDN18P56856 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.55□□□□□ -2
CLDN18P56856 RNU6-420P-201ENST00000458780 107 ntBASIC2.55□□□□□ -2
CLDN18P56856 RPS15AP34-201ENST00000487776 387 ntBASIC2.55□□□□□ -2
CLDN18P56856 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.55□□□□□ -2
CLDN18P56856 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.55□□□□□ -2
CLDN18P56856 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.55□□□□□ -2
CLDN18P56856 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
CLDN18P56856 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.55□□□□□ -2
CLDN18P56856 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLDN18P56856 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.55□□□□□ -2
CLDN18P56856 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.55□□□□□ -2
CLDN18P56856 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.55□□□□□ -2
CLDN18P56856 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.55□□□□□ -2
CLDN18P56856 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.55□□□□□ -2
CLDN18P56856 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.55□□□□□ -2
CLDN18P56856 MTCO3P13-201ENST00000577757 781 ntBASIC2.55□□□□□ -2
CLDN18P56856 ELOCP29-201ENST00000588193 334 ntBASIC2.55□□□□□ -2
CLDN18P56856 AL512283.1-201ENST00000606756 1384 ntBASIC2.55□□□□□ -2
CLDN18P56856 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CLDN18P56856 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.55□□□□□ -2
CLDN18P56856 OR5H6-203ENST00000642105 978 ntBASIC2.55□□□□□ -2
CLDN18P56856 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
CLDN18P56856 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.55□□□□□ -2
CLDN18P56856 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.55□□□□□ -2
CLDN18P56856 GABRG2-229ENST00000641017 3628 ntBASIC2.54□□□□□ -2
CLDN18P56856 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.54□□□□□ -2
CLDN18P56856 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLDN18P56856 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLDN18P56856 RNU1-35P-201ENST00000362782 153 ntBASIC2.54□□□□□ -2
CLDN18P56856 Y_RNA.111-201ENST00000363248 100 ntBASIC2.54□□□□□ -2
CLDN18P56856 MIR325-201ENST00000385260 98 ntBASIC2.54□□□□□ -2
CLDN18P56856 MIR767-201ENST00000390228 109 ntBASIC2.54□□□□□ -2
CLDN18P56856 MTND4P13-201ENST00000402078 1023 ntBASIC2.54□□□□□ -2
CLDN18P56856 RPL7P27-201ENST00000403775 720 ntBASIC2.54□□□□□ -2
CLDN18P56856 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN18P56856 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.54□□□□□ -2
CLDN18P56856 AC087499.2-201ENST00000432861 149 ntBASIC2.54□□□□□ -2
CLDN18P56856 RPL26P6-201ENST00000440913 438 ntBASIC2.54□□□□□ -2
CLDN18P56856 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.54□□□□□ -2
CLDN18P56856 RPL39P6-201ENST00000448289 150 ntBASIC2.54□□□□□ -2
CLDN18P56856 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.54□□□□□ -2
CLDN18P56856 RPL21P41-201ENST00000459863 264 ntBASIC2.54□□□□□ -2
CLDN18P56856 AL049874.1-201ENST00000489560 388 ntBASIC2.54□□□□□ -2
CLDN18P56856 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLDN18P56856 AP001025.2-201ENST00000490908 477 ntBASIC2.54□□□□□ -2
CLDN18P56856 RPS27P26-201ENST00000494583 239 ntBASIC2.54□□□□□ -2
CLDN18P56856 AC098799.1-201ENST00000504752 800 ntBASIC2.54□□□□□ -2
CLDN18P56856 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.54□□□□□ -2
CLDN18P56856 OR5BM1P-201ENST00000512021 366 ntBASIC2.54□□□□□ -2
CLDN18P56856 AC022483.1-201ENST00000514020 567 ntBASIC2.54□□□□□ -2
CLDN18P56856 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.54□□□□□ -2
CLDN18P56856 RN7SKP132-201ENST00000516001 208 ntBASIC2.54□□□□□ -2
CLDN18P56856 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.54□□□□□ -2
CLDN18P56856 AP003049.1-201ENST00000529418 457 ntBASIC2.54□□□□□ -2
CLDN18P56856 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.54□□□□□ -2
CLDN18P56856 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.54□□□□□ -2
CLDN18P56856 AC103810.1-201ENST00000579873 453 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms