Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC068587.5-201ENST00000528506 175 ntBASIC4.26□□□□□ -1.73
PER3P56645 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.26□□□□□ -1.73
PER3P56645 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.26□□□□□ -1.73
PER3P56645 AC024619.4-201ENST00000580924 316 ntBASIC4.26□□□□□ -1.73
PER3P56645 MIR4719-201ENST00000585233 84 ntBASIC4.26□□□□□ -1.73
PER3P56645 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.26□□□□□ -1.73
PER3P56645 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.26□□□□□ -1.73
PER3P56645 IGHV3-29-201ENST00000604817 344 ntBASIC4.26□□□□□ -1.73
PER3P56645 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.26□□□□□ -1.73
PER3P56645 TUG1_2.1-201ENST00000614234 87 ntBASIC4.26□□□□□ -1.73
PER3P56645 MIR6130-201ENST00000619419 109 ntBASIC4.26□□□□□ -1.73
PER3P56645 AL022401.1-201ENST00000619498 108 ntBASIC4.26□□□□□ -1.73
PER3P56645 AC243312.2-201ENST00000623340 601 ntBASIC4.26□□□□□ -1.73
PER3P56645 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.26□□□□□ -1.73
PER3P56645 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PER3P56645 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PER3P56645 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.26□□□□□ -1.73
PER3P56645 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PER3P56645 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
PER3P56645 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PER3P56645 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PER3P56645 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PER3P56645 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
PER3P56645 MTND4P29-201ENST00000503122 1372 ntBASIC4.26□□□□□ -1.73
PER3P56645 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PER3P56645 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PER3P56645 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.25□□□□□ -1.73
PER3P56645 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PER3P56645 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.25□□□□□ -1.73
PER3P56645 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.25□□□□□ -1.73
PER3P56645 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PER3P56645 ZNF137P-201ENST00000456718 1920 ntBASIC4.25□□□□□ -1.73
PER3P56645 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PER3P56645 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PER3P56645 NACAP2-201ENST00000318548 624 ntBASIC4.25□□□□□ -1.73
PER3P56645 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PER3P56645 SNORA62.1-201ENST00000364287 154 ntBASIC4.25□□□□□ -1.73
PER3P56645 Y_RNA.813-201ENST00000364639 102 ntBASIC4.25□□□□□ -1.73
PER3P56645 Y_RNA.263-201ENST00000364659 114 ntBASIC4.25□□□□□ -1.73
PER3P56645 RNU6-641P-201ENST00000384006 107 ntBASIC4.25□□□□□ -1.73
PER3P56645 RNU1-82P-201ENST00000390851 165 ntBASIC4.25□□□□□ -1.73
PER3P56645 RNU6-332P-201ENST00000391193 108 ntBASIC4.25□□□□□ -1.73
PER3P56645 RPS26P8-201ENST00000393490 348 ntBASIC4.25□□□□□ -1.73
PER3P56645 RPL32P23-201ENST00000397237 405 ntBASIC4.25□□□□□ -1.73
PER3P56645 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PER3P56645 RNU4-65P-201ENST00000410473 140 ntBASIC4.25□□□□□ -1.73
PER3P56645 RNU6-1148P-201ENST00000410992 104 ntBASIC4.25□□□□□ -1.73
PER3P56645 AC114491.1-201ENST00000416095 246 ntBASIC4.25□□□□□ -1.73
PER3P56645 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.25□□□□□ -1.73
PER3P56645 AL162389.1-201ENST00000449233 177 ntBASIC4.25□□□□□ -1.73
PER3P56645 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.25□□□□□ -1.73
PER3P56645 AC234775.1-201ENST00000454247 670 ntBASIC4.25□□□□□ -1.73
PER3P56645 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.25□□□□□ -1.73
PER3P56645 RPL23AP24-201ENST00000458203 385 ntBASIC4.25□□□□□ -1.73
PER3P56645 RPS29P15-201ENST00000458329 171 ntBASIC4.25□□□□□ -1.73
PER3P56645 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.25□□□□□ -1.73
PER3P56645 AC004062.1-201ENST00000509926 645 ntBASIC4.25□□□□□ -1.73
PER3P56645 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.25□□□□□ -1.73
PER3P56645 RNA5SP392-201ENST00000516905 112 ntBASIC4.25□□□□□ -1.73
PER3P56645 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.25□□□□□ -1.73
PER3P56645 OR4R3P-201ENST00000525084 838 ntBASIC4.25□□□□□ -1.73
PER3P56645 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.25□□□□□ -1.73
PER3P56645 AC125611.2-201ENST00000551907 647 ntBASIC4.25□□□□□ -1.73
PER3P56645 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.25□□□□□ -1.73
PER3P56645 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.25□□□□□ -1.73
PER3P56645 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.25□□□□□ -1.73
PER3P56645 AL034351.1-201ENST00000605288 668 ntBASIC4.25□□□□□ -1.73
PER3P56645 AC012443.1-201ENST00000605605 231 ntBASIC4.25□□□□□ -1.73
PER3P56645 HMGN2P28-201ENST00000606102 262 ntBASIC4.25□□□□□ -1.73
PER3P56645 MIR92B-201ENST00000607575 96 ntBASIC4.25□□□□□ -1.73
PER3P56645 AL450472.3-201ENST00000615578 367 ntBASIC4.25□□□□□ -1.73
PER3P56645 AL359697.1-201ENST00000624879 587 ntBASIC4.25□□□□□ -1.73
PER3P56645 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PER3P56645 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PER3P56645 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.25□□□□□ -1.73
PER3P56645 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PER3P56645 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PER3P56645 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.25□□□□□ -1.73
PER3P56645 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.25□□□□□ -1.73
PER3P56645 MTND5P17-201ENST00000418405 1603 ntBASIC4.24□□□□□ -1.73
PER3P56645 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PER3P56645 ASNSP3-201ENST00000451989 1306 ntBASIC4.24□□□□□ -1.73
PER3P56645 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PER3P56645 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PER3P56645 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PER3P56645 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PER3P56645 AL139276.1-201ENST00000311910 1001 ntBASIC4.24□□□□□ -1.73
PER3P56645 RNU6-845P-201ENST00000362578 103 ntBASIC4.24□□□□□ -1.73
PER3P56645 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PER3P56645 AL080315.1-201ENST00000406055 466 ntBASIC4.24□□□□□ -1.73
PER3P56645 RNU6-373P-201ENST00000411247 98 ntBASIC4.24□□□□□ -1.73
PER3P56645 RPL21P24-201ENST00000413752 448 ntBASIC4.24□□□□□ -1.73
PER3P56645 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.24□□□□□ -1.73
PER3P56645 PDCL2P1-201ENST00000419302 352 ntBASIC4.24□□□□□ -1.73
PER3P56645 AL137014.1-201ENST00000420490 1226 ntBASIC4.24□□□□□ -1.73
PER3P56645 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.24□□□□□ -1.73
PER3P56645 AC093106.2-201ENST00000428212 385 ntBASIC4.24□□□□□ -1.73
PER3P56645 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.24□□□□□ -1.73
PER3P56645 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.24□□□□□ -1.73
PER3P56645 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms