Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PRELID2P1-201ENST00000552837 301 ntBASIC2.21□□□□□ -2.06
NUP98P52948 DNAJC8P1-201ENST00000554535 372 ntBASIC2.21□□□□□ -2.06
NUP98P52948 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.21□□□□□ -2.06
NUP98P52948 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NUP98P52948 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NUP98P52948 AC073111.2-201ENST00000605657 1075 ntBASIC2.21□□□□□ -2.06
NUP98P52948 CR381572.1-201ENST00000625098 102 ntBASIC2.21□□□□□ -2.06
NUP98P52948 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NUP98P52948 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NUP98P52948 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
NUP98P52948 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
NUP98P52948 RPL19P1-201ENST00000411635 428 ntBASIC2.2□□□□□ -2.06
NUP98P52948 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.2□□□□□ -2.06
NUP98P52948 AP1B1P2-201ENST00000416196 106 ntBASIC2.2□□□□□ -2.06
NUP98P52948 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.2□□□□□ -2.06
NUP98P52948 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.2□□□□□ -2.06
NUP98P52948 RPL23AP20-201ENST00000447965 421 ntBASIC2.2□□□□□ -2.06
NUP98P52948 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.2□□□□□ -2.06
NUP98P52948 AC104564.1-201ENST00000493028 407 ntBASIC2.2□□□□□ -2.06
NUP98P52948 AC090453.1-201ENST00000495560 436 ntBASIC2.2□□□□□ -2.06
NUP98P52948 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.2□□□□□ -2.06
NUP98P52948 MTND2P26-201ENST00000528255 1029 ntBASIC2.2□□□□□ -2.06
NUP98P52948 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.2□□□□□ -2.06
NUP98P52948 MIR4419B-201ENST00000577260 68 ntBASIC2.2□□□□□ -2.06
NUP98P52948 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.2□□□□□ -2.06
NUP98P52948 AC012150.2-201ENST00000621300 544 ntBASIC2.2□□□□□ -2.06
NUP98P52948 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.2□□□□□ -2.06
NUP98P52948 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
NUP98P52948 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUP98P52948 MTND4P13-201ENST00000402078 1023 ntBASIC2.19□□□□□ -2.06
NUP98P52948 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.19□□□□□ -2.06
NUP98P52948 AL645568.3-201ENST00000433683 316 ntBASIC2.19□□□□□ -2.06
NUP98P52948 NDUFB4P6-201ENST00000436819 366 ntBASIC2.19□□□□□ -2.06
NUP98P52948 SSXP1-201ENST00000453640 473 ntBASIC2.19□□□□□ -2.06
NUP98P52948 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.19□□□□□ -2.06
NUP98P52948 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP98P52948 AC025857.1-201ENST00000525252 377 ntBASIC2.19□□□□□ -2.06
NUP98P52948 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP98P52948 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP98P52948 AC034268.2-201ENST00000571784 482 ntBASIC2.19□□□□□ -2.06
NUP98P52948 AC104581.2-201ENST00000572227 430 ntBASIC2.19□□□□□ -2.06
NUP98P52948 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
NUP98P52948 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP98P52948 AL590099.1-201ENST00000615276 138 ntBASIC2.19□□□□□ -2.06
NUP98P52948 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.19□□□□□ -2.06
NUP98P52948 MTND4P23-201ENST00000447723 1363 ntBASIC2.19□□□□□ -2.06
NUP98P52948 RNU6-386P-201ENST00000362650 107 ntBASIC2.19□□□□□ -2.06
NUP98P52948 RNU6-335P-201ENST00000364563 113 ntBASIC2.19□□□□□ -2.06
NUP98P52948 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP98P52948 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP98P52948 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP98P52948 SNRPEP4-201ENST00000435815 279 ntBASIC2.19□□□□□ -2.06
NUP98P52948 HMGB1P31-201ENST00000437242 427 ntBASIC2.19□□□□□ -2.06
NUP98P52948 USP9YP15-201ENST00000442391 422 ntBASIC2.19□□□□□ -2.06
NUP98P52948 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP98P52948 CDC42P1-201ENST00000456658 548 ntBASIC2.19□□□□□ -2.06
NUP98P52948 HMGN1P8-201ENST00000463578 288 ntBASIC2.19□□□□□ -2.06
NUP98P52948 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP98P52948 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.19□□□□□ -2.06
NUP98P52948 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NUP98P52948 AL009028.1-201ENST00000604895 802 ntBASIC2.19□□□□□ -2.06
NUP98P52948 snoU13.31-201ENST00000607291 104 ntBASIC2.19□□□□□ -2.06
NUP98P52948 AC135803.1-201ENST00000608748 565 ntBASIC2.19□□□□□ -2.06
NUP98P52948 VN1R74P-201ENST00000613259 503 ntBASIC2.19□□□□□ -2.06
NUP98P52948 AC104307.1-201ENST00000616142 196 ntBASIC2.19□□□□□ -2.06
NUP98P52948 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.18□□□□□ -2.06
NUP98P52948 AP002907.1-201ENST00000606361 1430 ntBASIC2.18□□□□□ -2.06
NUP98P52948 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NUP98P52948 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.18□□□□□ -2.06
NUP98P52948 AL121972.1-201ENST00000402023 252 ntBASIC2.18□□□□□ -2.06
NUP98P52948 NUP35P2-201ENST00000416748 943 ntBASIC2.18□□□□□ -2.06
NUP98P52948 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.18□□□□□ -2.06
NUP98P52948 ARL5AP3-201ENST00000439327 386 ntBASIC2.18□□□□□ -2.06
NUP98P52948 RPL23AP76-201ENST00000441860 458 ntBASIC2.18□□□□□ -2.06
NUP98P52948 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.18□□□□□ -2.06
NUP98P52948 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.18□□□□□ -2.06
NUP98P52948 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.18□□□□□ -2.06
NUP98P52948 AC008494.2-201ENST00000514544 370 ntBASIC2.18□□□□□ -2.06
NUP98P52948 RNU6-711P-201ENST00000517255 106 ntBASIC2.18□□□□□ -2.06
NUP98P52948 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.18□□□□□ -2.06
NUP98P52948 AL109653.1-201ENST00000603091 248 ntBASIC2.18□□□□□ -2.06
NUP98P52948 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.18□□□□□ -2.06
NUP98P52948 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NUP98P52948 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
NUP98P52948 RNU6-661P-201ENST00000362409 107 ntBASIC2.17□□□□□ -2.06
NUP98P52948 RNU6-14P-201ENST00000384630 106 ntBASIC2.17□□□□□ -2.06
NUP98P52948 RN7SKP101-201ENST00000411376 320 ntBASIC2.17□□□□□ -2.06
NUP98P52948 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUP98P52948 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.17□□□□□ -2.06
NUP98P52948 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.17□□□□□ -2.06
NUP98P52948 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NUP98P52948 HMGN2P13-201ENST00000476476 274 ntBASIC2.17□□□□□ -2.06
NUP98P52948 NCOR1P1-202ENST00000486162 291 ntBASIC2.17□□□□□ -2.06
NUP98P52948 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NUP98P52948 AC004062.1-201ENST00000509926 645 ntBASIC2.17□□□□□ -2.06
NUP98P52948 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.17□□□□□ -2.06
NUP98P52948 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.17□□□□□ -2.06
NUP98P52948 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.17□□□□□ -2.06
NUP98P52948 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.17□□□□□ -2.06
NUP98P52948 AL049838.1-201ENST00000563647 981 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms