Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX2P48431 AC117522.1-201ENST00000509821 380 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AC008549.1-201ENST00000512900 643 ntBASIC3.67□□□□□ -1.82
SOX2P48431 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX2P48431 FTH1P9-201ENST00000513251 355 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX2P48431 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.67□□□□□ -1.82
SOX2P48431 Y_RNA.702-201ENST00000516843 96 ntBASIC3.67□□□□□ -1.82
SOX2P48431 SNORA20.3-201ENST00000516880 132 ntBASIC3.67□□□□□ -1.82
SOX2P48431 RNU6-835P-201ENST00000516974 104 ntBASIC3.67□□□□□ -1.82
SOX2P48431 HMGB1P41-201ENST00000520234 440 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.67□□□□□ -1.82
SOX2P48431 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX2P48431 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX2P48431 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.67□□□□□ -1.82
SOX2P48431 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.67□□□□□ -1.82
SOX2P48431 AL121603.1-201ENST00000553815 142 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.67□□□□□ -1.82
SOX2P48431 AC055876.1-202ENST00000567053 138 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX2P48431 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.67□□□□□ -1.82
SOX2P48431 AL034351.1-201ENST00000605288 668 ntBASIC3.67□□□□□ -1.82
SOX2P48431 HMGN2P28-201ENST00000606102 262 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AL136295.6-201ENST00000610486 658 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.67□□□□□ -1.82
SOX2P48431 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.67□□□□□ -1.82
SOX2P48431 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SOX2P48431 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SOX2P48431 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SOX2P48431 AC018555.1-201ENST00000567548 1980 ntBASIC3.67□□□□□ -1.82
SOX2P48431 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SOX2P48431 LINC02471-203ENST00000641941 4752 ntBASIC3.66□□□□□ -1.82
SOX2P48431 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
SOX2P48431 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SOX2P48431 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SOX2P48431 OR5P1P-201ENST00000299512 925 ntBASIC3.66□□□□□ -1.82
SOX2P48431 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SOX2P48431 Y_RNA.22-201ENST00000362492 102 ntBASIC3.66□□□□□ -1.82
SOX2P48431 RNU4-48P-201ENST00000365559 182 ntBASIC3.66□□□□□ -1.82
SOX2P48431 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SOX2P48431 RNU6-641P-201ENST00000384006 107 ntBASIC3.66□□□□□ -1.82
SOX2P48431 MIR105-2-201ENST00000385083 81 ntBASIC3.66□□□□□ -1.82
SOX2P48431 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SOX2P48431 AL591416.1-201ENST00000404015 867 ntBASIC3.66□□□□□ -1.82
SOX2P48431 RPL21P24-201ENST00000413752 448 ntBASIC3.66□□□□□ -1.82
SOX2P48431 OR51A5P-201ENST00000415429 942 ntBASIC3.66□□□□□ -1.82
SOX2P48431 MTCO3P12-201ENST00000416718 547 ntBASIC3.66□□□□□ -1.82
SOX2P48431 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.66□□□□□ -1.82
SOX2P48431 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.66□□□□□ -1.82
SOX2P48431 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.66□□□□□ -1.82
SOX2P48431 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.66□□□□□ -1.82
SOX2P48431 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.66□□□□□ -1.82
SOX2P48431 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.66□□□□□ -1.82
SOX2P48431 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.66□□□□□ -1.82
SOX2P48431 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.66□□□□□ -1.82
SOX2P48431 SNORD97-201ENST00000459187 142 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC092324.1-201ENST00000468671 324 ntBASIC3.66□□□□□ -1.82
SOX2P48431 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.66□□□□□ -1.82
SOX2P48431 AC083982.1-201ENST00000485679 344 ntBASIC3.66□□□□□ -1.82
SOX2P48431 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC020593.1-201ENST00000507399 299 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC098799.2-201ENST00000509466 868 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.66□□□□□ -1.82
SOX2P48431 AC025465.4-201ENST00000513422 638 ntBASIC3.66□□□□□ -1.82
SOX2P48431 SNORD27.1-201ENST00000516319 72 ntBASIC3.66□□□□□ -1.82
SOX2P48431 IGKV2-38-201ENST00000517443 247 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.66□□□□□ -1.82
SOX2P48431 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.66□□□□□ -1.82
SOX2P48431 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.66□□□□□ -1.82
SOX2P48431 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.66□□□□□ -1.82
SOX2P48431 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.66□□□□□ -1.82
SOX2P48431 AF235103.2-201ENST00000525753 346 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC018630.1-201ENST00000541376 925 ntBASIC3.66□□□□□ -1.82
SOX2P48431 ARL2BPP2-201ENST00000550907 489 ntBASIC3.66□□□□□ -1.82
SOX2P48431 HIF1AP1-201ENST00000553642 175 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC084783.1-201ENST00000565846 910 ntBASIC3.66□□□□□ -1.82
SOX2P48431 RN7SL690P-201ENST00000582087 240 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC090616.5-202ENST00000582111 297 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC005730.3-201ENST00000583067 366 ntBASIC3.66□□□□□ -1.82
SOX2P48431 MIR4293-201ENST00000584305 78 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.66□□□□□ -1.82
SOX2P48431 AC013244.1-201ENST00000604279 193 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AL121992.2-201ENST00000606262 256 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC211433.2-201ENST00000608433 387 ntBASIC3.66□□□□□ -1.82
SOX2P48431 AC063943.3-201ENST00000615562 356 ntBASIC3.66□□□□□ -1.82
SOX2P48431 uc_338.13-201ENST00000618243 179 ntBASIC3.66□□□□□ -1.82
SOX2P48431 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.66□□□□□ -1.82
SOX2P48431 AC103858.2-201ENST00000621471 543 ntBASIC3.66□□□□□ -1.82
SOX2P48431 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.66□□□□□ -1.82
SOX2P48431 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SOX2P48431 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SOX2P48431 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SOX2P48431 MARK2P15-201ENST00000432204 2186 ntBASIC3.66□□□□□ -1.82
SOX2P48431 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SOX2P48431 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.66□□□□□ -1.82
SOX2P48431 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.66□□□□□ -1.82
SOX2P48431 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SOX2P48431 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.82
SOX2P48431 AL645937.1-201ENST00000641739 1652 ntBASIC3.65□□□□□ -1.82
SOX2P48431 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms