Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MTCYBP42-201ENST00000444653 1130 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
CXCL12P48061 PABPC1P3-201ENST00000469174 459 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC010301.1-201ENST00000473936 355 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.53□□□□□ -2
CXCL12P48061 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.53□□□□□ -2
CXCL12P48061 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.53□□□□□ -2
CXCL12P48061 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.53□□□□□ -2
CXCL12P48061 RNU6-1028P-201ENST00000517164 93 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.53□□□□□ -2
CXCL12P48061 ARL2BPP5-201ENST00000523141 481 ntBASIC2.53□□□□□ -2
CXCL12P48061 ZNF705CP-201ENST00000530515 889 ntBASIC2.53□□□□□ -2
CXCL12P48061 AP003385.6-201ENST00000531603 374 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC007536.1-201ENST00000533382 349 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC128657.1-201ENST00000549459 145 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC025754.2-201ENST00000606491 432 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.53□□□□□ -2
CXCL12P48061 AC093673.2-201ENST00000609674 331 ntBASIC2.53□□□□□ -2
CXCL12P48061 RNU6-1192P-201ENST00000612197 107 ntBASIC2.53□□□□□ -2
CXCL12P48061 RNU6-489P-201ENST00000618289 107 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC073968.1-201ENST00000618594 637 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC090617.7-201ENST00000623952 126 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC087821.2-201ENST00000637086 450 ntBASIC2.53□□□□□ -2
CXCL12P48061 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.53□□□□□ -2
CXCL12P48061 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.53□□□□□ -2
CXCL12P48061 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL12P48061 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL12P48061 AC006020.1-201ENST00000420179 1854 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL12P48061 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CXCL12P48061 RNU6-492P-201ENST00000363035 104 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 RNU6-1066P-201ENST00000363573 105 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.52□□□□□ -2.01
CXCL12P48061 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CXCL12P48061 RNU6-253P-201ENST00000384730 105 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 RNU6-1176P-201ENST00000390955 107 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 RNU6-482P-201ENST00000391068 107 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 RNU4-26P-201ENST00000410270 107 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 HSPE1P1-201ENST00000421494 318 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AC241584.1-201ENST00000438469 1241 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 HMGB1P18-201ENST00000438801 619 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AC093155.1-201ENST00000440164 826 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.52□□□□□ -2.01
CXCL12P48061 AC004022.1-201ENST00000447766 1066 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 RPL23AP45-201ENST00000476406 468 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CXCL12P48061 AC118282.1-201ENST00000506408 765 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AC234781.5-201ENST00000508429 271 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AC093752.1-206ENST00000511823 336 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 SNORA19.3-201ENST00000516165 130 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 SNORD59.2-201ENST00000516873 68 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL12P48061 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.52□□□□□ -2.01
CXCL12P48061 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL12P48061 AC100870.1-201ENST00000522035 505 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.52□□□□□ -2.01
CXCL12P48061 AP004371.1-201ENST00000525240 214 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL12P48061 AC090502.2-201ENST00000549267 280 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.52□□□□□ -2.01
CXCL12P48061 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL12P48061 RPL23AP84-201ENST00000571193 464 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 MIR1273D-201ENST00000577266 86 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 MIR5708-201ENST00000579723 85 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL12P48061 AC005014.3-201ENST00000605985 190 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AC092954.1-201ENST00000609121 445 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AC131902.3-201ENST00000611767 581 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
CXCL12P48061 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CXCL12P48061 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL12P48061 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
CXCL12P48061 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL12P48061 DBF4P1-201ENST00000412976 1892 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL12P48061 AC092435.3-201ENST00000565538 3654 ntBASIC2.52□□□□□ -2.01
CXCL12P48061 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CXCL12P48061 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CXCL12P48061 RNA5SP258-201ENST00000362750 119 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 SNORD82-201ENST00000365530 70 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 SNORA26.7-201ENST00000391288 122 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 RPS3AP26-201ENST00000398259 784 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 AL079342.2-201ENST00000403367 482 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 AL133384.1-201ENST00000412744 351 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.51□□□□□ -2.01
CXCL12P48061 MTCO3P1-205ENST00000422088 832 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.51□□□□□ -2.01
CXCL12P48061 AC092393.1-201ENST00000439625 742 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 RPL21P2-201ENST00000440049 481 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 GAPDHP27-201ENST00000447427 1020 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 RN7SL75P-201ENST00000461926 281 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 AC104982.1-201ENST00000478775 574 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.51□□□□□ -2.01
CXCL12P48061 HMGB1P22-201ENST00000505315 124 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 ARL4AP2-201ENST00000507378 601 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 RNU6-711P-201ENST00000517255 106 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 DEFB130C-202ENST00000530001 230 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 RANP3-201ENST00000530970 276 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms