Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RNA5SP108-201ENST00000605921 117 ntBASIC4.92□□□□□ -1.62
CCNFP41002 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.92□□□□□ -1.62
CCNFP41002 AC243312.2-201ENST00000623340 601 ntBASIC4.92□□□□□ -1.62
CCNFP41002 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNFP41002 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.92□□□□□ -1.62
CCNFP41002 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNFP41002 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CCNFP41002 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNFP41002 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCNFP41002 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCNFP41002 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNFP41002 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCNFP41002 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCNFP41002 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.91□□□□□ -1.62
CCNFP41002 RNU1-94P-201ENST00000362627 173 ntBASIC4.91□□□□□ -1.62
CCNFP41002 RNA5SP305-201ENST00000362665 119 ntBASIC4.91□□□□□ -1.62
CCNFP41002 RNU6-1249P-201ENST00000363237 111 ntBASIC4.91□□□□□ -1.62
CCNFP41002 RNU6-254P-201ENST00000363377 107 ntBASIC4.91□□□□□ -1.62
CCNFP41002 RNA5SP507-201ENST00000363603 121 ntBASIC4.91□□□□□ -1.62
CCNFP41002 RNU6-82P-201ENST00000363970 107 ntBASIC4.91□□□□□ -1.62
CCNFP41002 MIR135A2-201ENST00000384854 100 ntBASIC4.91□□□□□ -1.62
CCNFP41002 RNU6-308P-201ENST00000390957 107 ntBASIC4.91□□□□□ -1.62
CCNFP41002 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.91□□□□□ -1.62
CCNFP41002 CALM2P2-201ENST00000428512 440 ntBASIC4.91□□□□□ -1.62
CCNFP41002 RPS27P18-201ENST00000431701 247 ntBASIC4.91□□□□□ -1.62
CCNFP41002 AL451139.1-201ENST00000434718 346 ntBASIC4.91□□□□□ -1.62
CCNFP41002 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCNFP41002 RPL30P15-201ENST00000457129 321 ntBASIC4.91□□□□□ -1.62
CCNFP41002 RPSAP50-201ENST00000481955 852 ntBASIC4.91□□□□□ -1.62
CCNFP41002 AC108145.1-201ENST00000503770 153 ntBASIC4.91□□□□□ -1.62
CCNFP41002 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CCNFP41002 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.91□□□□□ -1.62
CCNFP41002 AC093303.1-201ENST00000514549 295 ntBASIC4.91□□□□□ -1.62
CCNFP41002 Y_RNA.711-201ENST00000516993 102 ntBASIC4.91□□□□□ -1.62
CCNFP41002 COPS8P3-201ENST00000526024 482 ntBASIC4.91□□□□□ -1.62
CCNFP41002 HMGN2P6-201ENST00000551091 273 ntBASIC4.91□□□□□ -1.62
CCNFP41002 OR11H5P-201ENST00000554039 926 ntBASIC4.91□□□□□ -1.62
CCNFP41002 HMGB3P26-201ENST00000560051 582 ntBASIC4.91□□□□□ -1.62
CCNFP41002 MIR3691-201ENST00000578066 90 ntBASIC4.91□□□□□ -1.62
CCNFP41002 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.91□□□□□ -1.62
CCNFP41002 AC138761.3-201ENST00000579993 334 ntBASIC4.91□□□□□ -1.62
CCNFP41002 MIR3672-201ENST00000584290 82 ntBASIC4.91□□□□□ -1.62
CCNFP41002 AC008737.2-201ENST00000599446 118 ntBASIC4.91□□□□□ -1.62
CCNFP41002 AC012669.1-201ENST00000603209 283 ntBASIC4.91□□□□□ -1.62
CCNFP41002 AC105254.2-201ENST00000603636 436 ntBASIC4.91□□□□□ -1.62
CCNFP41002 AC093799.2-201ENST00000610062 578 ntBASIC4.91□□□□□ -1.62
CCNFP41002 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.91□□□□□ -1.62
CCNFP41002 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.91□□□□□ -1.62
CCNFP41002 AC244517.12-201ENST00000623581 663 ntBASIC4.91□□□□□ -1.62
CCNFP41002 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.91□□□□□ -1.62
CCNFP41002 AL359922.3-201ENST00000624779 1670 ntBASIC4.91□□□□□ -1.62
CCNFP41002 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCNFP41002 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCNFP41002 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.91□□□□□ -1.62
CCNFP41002 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.91□□□□□ -1.62
CCNFP41002 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCNFP41002 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.9□□□□□ -1.62
CCNFP41002 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCNFP41002 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.9□□□□□ -1.62
CCNFP41002 RNA5SP443-201ENST00000363083 132 ntBASIC4.9□□□□□ -1.63
CCNFP41002 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCNFP41002 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCNFP41002 RNU1-106P-201ENST00000384382 164 ntBASIC4.9□□□□□ -1.63
CCNFP41002 NDUFS5P1-201ENST00000405668 289 ntBASIC4.9□□□□□ -1.63
CCNFP41002 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.9□□□□□ -1.63
CCNFP41002 RN7SKP158-201ENST00000410453 326 ntBASIC4.9□□□□□ -1.63
CCNFP41002 RPL23AP27-201ENST00000415161 451 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNFP41002 CYCSP43-201ENST00000438233 310 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNFP41002 CEACAMP7-201ENST00000444105 496 ntBASIC4.9□□□□□ -1.63
CCNFP41002 TDGF1P1-201ENST00000445734 527 ntBASIC4.9□□□□□ -1.63
CCNFP41002 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.9□□□□□ -1.63
CCNFP41002 RPS15AP27-201ENST00000449183 343 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AC073850.1-201ENST00000449243 255 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNFP41002 AC007686.1-201ENST00000488511 463 ntBASIC4.9□□□□□ -1.63
CCNFP41002 RPL7P23-201ENST00000493874 747 ntBASIC4.9□□□□□ -1.63
CCNFP41002 HIGD1AP13-201ENST00000509878 289 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AC004980.4-201ENST00000513375 203 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.9□□□□□ -1.63
CCNFP41002 RNU6-1095P-201ENST00000516148 108 ntBASIC4.9□□□□□ -1.63
CCNFP41002 Y_RNA.719-201ENST00000517156 106 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNFP41002 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNFP41002 AL163153.1-201ENST00000554223 283 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNFP41002 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNFP41002 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.9□□□□□ -1.63
CCNFP41002 AC006116.10-201ENST00000591836 581 ntBASIC4.9□□□□□ -1.63
CCNFP41002 DPPA3P3-201ENST00000603842 430 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AL138889.2-201ENST00000603883 242 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AC019193.3-201ENST00000609144 554 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AC012409.4-201ENST00000612923 249 ntBASIC4.9□□□□□ -1.63
CCNFP41002 AL627230.1-201ENST00000613077 211 ntBASIC4.9□□□□□ -1.63
CCNFP41002 EIF3FP1-201ENST00000613970 806 ntBASIC4.9□□□□□ -1.63
CCNFP41002 uc_338.18-201ENST00000615451 175 ntBASIC4.9□□□□□ -1.63
CCNFP41002 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CCNFP41002 AP002799.1-201ENST00000623552 423 ntBASIC4.9□□□□□ -1.63
CCNFP41002 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms