Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 HMGN1P18-201ENST00000457642 277 ntBASIC3.15□□□□□ -1.91
FEN1P39748 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.15□□□□□ -1.91
FEN1P39748 AC021205.2-201ENST00000480069 347 ntBASIC3.15□□□□□ -1.91
FEN1P39748 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.15□□□□□ -1.91
FEN1P39748 POU5F1P7-201ENST00000508759 541 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AC004062.1-201ENST00000509926 645 ntBASIC3.15□□□□□ -1.91
FEN1P39748 MTND1P22-201ENST00000510572 951 ntBASIC3.15□□□□□ -1.91
FEN1P39748 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FEN1P39748 APOOP4-201ENST00000513530 597 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.15□□□□□ -1.91
FEN1P39748 RNU6-759P-201ENST00000516740 103 ntBASIC3.15□□□□□ -1.91
FEN1P39748 MTND2P38-201ENST00000522536 667 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.15□□□□□ -1.91
FEN1P39748 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.15□□□□□ -1.91
FEN1P39748 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.15□□□□□ -1.91
FEN1P39748 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.15□□□□□ -1.91
FEN1P39748 AC007954.1-201ENST00000554198 494 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AC005476.1-201ENST00000554427 397 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AC090888.1-201ENST00000561335 1141 ntBASIC3.15□□□□□ -1.91
FEN1P39748 MTCO3P24-201ENST00000572729 782 ntBASIC3.15□□□□□ -1.91
FEN1P39748 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.15□□□□□ -1.91
FEN1P39748 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.15□□□□□ -1.91
FEN1P39748 OR4K8P-201ENST00000578842 1048 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AC015917.1-201ENST00000579654 510 ntBASIC3.15□□□□□ -1.91
FEN1P39748 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.15□□□□□ -1.91
FEN1P39748 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.15□□□□□ -1.91
FEN1P39748 AL357094.1-201ENST00000603845 844 ntBASIC3.15□□□□□ -1.91
FEN1P39748 VIS1.1-201ENST00000610517 203 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AC122133.1-201ENST00000613964 233 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AL353748.2-201ENST00000622148 471 ntBASIC3.15□□□□□ -1.91
FEN1P39748 OR8B1P-202ENST00000641132 1178 ntBASIC3.15□□□□□ -1.91
FEN1P39748 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.15□□□□□ -1.91
FEN1P39748 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
FEN1P39748 MAPK10-362ENST00000641864 4484 ntBASIC3.15□□□□□ -1.91
FEN1P39748 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.14□□□□□ -1.91
FEN1P39748 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC092447.10-201ENST00000620607 1652 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AF117829.1-206ENST00000621883 3802 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.14□□□□□ -1.91
FEN1P39748 RNU6-1155P-201ENST00000363554 107 ntBASIC3.14□□□□□ -1.91
FEN1P39748 RNU6-553P-201ENST00000364047 96 ntBASIC3.14□□□□□ -1.91
FEN1P39748 MIR135A2-201ENST00000384854 100 ntBASIC3.14□□□□□ -1.91
FEN1P39748 RNA5SP171-201ENST00000391071 115 ntBASIC3.14□□□□□ -1.91
FEN1P39748 RNU1-101P-201ENST00000391171 127 ntBASIC3.14□□□□□ -1.91
FEN1P39748 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
FEN1P39748 MTCO1P17-201ENST00000411522 491 ntBASIC3.14□□□□□ -1.91
FEN1P39748 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.14□□□□□ -1.91
FEN1P39748 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.14□□□□□ -1.91
FEN1P39748 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.14□□□□□ -1.91
FEN1P39748 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.14□□□□□ -1.91
FEN1P39748 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.14□□□□□ -1.91
FEN1P39748 RPL21P66-201ENST00000426566 466 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.14□□□□□ -1.91
FEN1P39748 YME1L1P1-201ENST00000429435 297 ntBASIC3.14□□□□□ -1.91
FEN1P39748 RSU1P2-202ENST00000437884 485 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC091862.1-201ENST00000438016 1100 ntBASIC3.14□□□□□ -1.91
FEN1P39748 OR6K5P-201ENST00000447050 945 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AP000542.1-201ENST00000448473 371 ntBASIC3.14□□□□□ -1.91
FEN1P39748 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
FEN1P39748 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.14□□□□□ -1.91
FEN1P39748 CYCSP35-201ENST00000451978 304 ntBASIC3.14□□□□□ -1.91
FEN1P39748 RPL21P10-201ENST00000463521 490 ntBASIC3.14□□□□□ -1.91
FEN1P39748 RN7SL293P-201ENST00000481765 281 ntBASIC3.14□□□□□ -1.91
FEN1P39748 OR2A20P-203ENST00000498397 1268 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC119751.5-201ENST00000514077 770 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC007834.2-201ENST00000536310 343 ntBASIC3.14□□□□□ -1.91
FEN1P39748 OSBPL9P5-201ENST00000542581 171 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.14□□□□□ -1.91
FEN1P39748 AC012435.1-202ENST00000568772 240 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.14□□□□□ -1.91
FEN1P39748 AC034268.2-201ENST00000571784 482 ntBASIC3.14□□□□□ -1.91
FEN1P39748 MIR544B-201ENST00000582372 78 ntBASIC3.14□□□□□ -1.91
FEN1P39748 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.14□□□□□ -1.91
FEN1P39748 BNIP3P23-201ENST00000599655 511 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AL109653.1-201ENST00000603091 248 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC107214.2-201ENST00000608204 634 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC004832.5-201ENST00000608677 401 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC103710.4-201ENST00000609301 899 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AL355365.1-201ENST00000616480 294 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC015967.1-201ENST00000619893 476 ntBASIC3.14□□□□□ -1.91
FEN1P39748 MIR6075-201ENST00000620782 95 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AL356321.1-201ENST00000621360 228 ntBASIC3.14□□□□□ -1.91
FEN1P39748 AC022079.1-201ENST00000621546 602 ntBASIC3.14□□□□□ -1.91
FEN1P39748 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FEN1P39748 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.14□□□□□ -1.91
FEN1P39748 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.14□□□□□ -1.91
FEN1P39748 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
FEN1P39748 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
FEN1P39748 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
FEN1P39748 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FEN1P39748 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.13□□□□□ -1.91
FEN1P39748 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
FEN1P39748 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FEN1P39748 RNU6-97P-201ENST00000363387 104 ntBASIC3.13□□□□□ -1.91
FEN1P39748 RNU6-359P-201ENST00000365466 108 ntBASIC3.13□□□□□ -1.91
FEN1P39748 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.13□□□□□ -1.91
FEN1P39748 Y_RNA.560-201ENST00000384689 102 ntBASIC3.13□□□□□ -1.91
FEN1P39748 MIR7-3-201ENST00000384898 110 ntBASIC3.13□□□□□ -1.91
FEN1P39748 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
FEN1P39748 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 2504.3 ms