Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL161449.1-201ENST00000414531 1199 ntBASIC2.78□□□□□ -1.96
RORAP35398 MTND4P3-201ENST00000417829 541 ntBASIC2.78□□□□□ -1.96
RORAP35398 RPL7P30-201ENST00000420888 709 ntBASIC2.78□□□□□ -1.96
RORAP35398 AL645937.1-202ENST00000421799 937 ntBASIC2.78□□□□□ -1.96
RORAP35398 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.78□□□□□ -1.96
RORAP35398 GSTA11P-201ENST00000452866 669 ntBASIC2.78□□□□□ -1.96
RORAP35398 AC004924.1-201ENST00000480160 781 ntBASIC2.78□□□□□ -1.96
RORAP35398 RN7SL633P-201ENST00000488974 297 ntBASIC2.78□□□□□ -1.96
RORAP35398 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.78□□□□□ -1.96
RORAP35398 AC112206.4-201ENST00000515142 405 ntBASIC2.78□□□□□ -1.96
RORAP35398 RNA5SP367-201ENST00000516557 118 ntBASIC2.78□□□□□ -1.96
RORAP35398 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.78□□□□□ -1.96
RORAP35398 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.78□□□□□ -1.96
RORAP35398 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.78□□□□□ -1.96
RORAP35398 AC024224.1-201ENST00000538284 609 ntBASIC2.78□□□□□ -1.96
RORAP35398 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RORAP35398 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.78□□□□□ -1.96
RORAP35398 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.78□□□□□ -1.96
RORAP35398 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RORAP35398 AC034105.3-201ENST00000565294 442 ntBASIC2.78□□□□□ -1.96
RORAP35398 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RORAP35398 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.78□□□□□ -1.96
RORAP35398 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.78□□□□□ -1.96
RORAP35398 AL022067.1-201ENST00000602426 454 ntBASIC2.78□□□□□ -1.96
RORAP35398 AC079089.3-201ENST00000603094 673 ntBASIC2.78□□□□□ -1.96
RORAP35398 U73023.1-201ENST00000603134 700 ntBASIC2.78□□□□□ -1.96
RORAP35398 AC012119.1-201ENST00000603184 222 ntBASIC2.78□□□□□ -1.96
RORAP35398 AC023158.2-201ENST00000614876 543 ntBASIC2.78□□□□□ -1.96
RORAP35398 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.78□□□□□ -1.96
RORAP35398 U6.101-201ENST00000637707 76 ntBASIC2.78□□□□□ -1.96
RORAP35398 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.78□□□□□ -1.96
RORAP35398 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RORAP35398 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
RORAP35398 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RORAP35398 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RORAP35398 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RORAP35398 SNRPEP3-201ENST00000338402 276 ntBASIC2.77□□□□□ -1.97
RORAP35398 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RORAP35398 Y_RNA.25-201ENST00000362528 102 ntBASIC2.77□□□□□ -1.97
RORAP35398 snoZ40.1-201ENST00000364540 72 ntBASIC2.77□□□□□ -1.97
RORAP35398 Y_RNA.500-201ENST00000384466 111 ntBASIC2.77□□□□□ -1.97
RORAP35398 Y_RNA.578-201ENST00000390903 88 ntBASIC2.77□□□□□ -1.97
RORAP35398 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RORAP35398 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
RORAP35398 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.77□□□□□ -1.97
RORAP35398 MTCO1P39-201ENST00000426148 480 ntBASIC2.77□□□□□ -1.97
RORAP35398 PSMA6P3-201ENST00000428242 164 ntBASIC2.77□□□□□ -1.97
RORAP35398 AC004866.2-201ENST00000438285 481 ntBASIC2.77□□□□□ -1.97
RORAP35398 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.77□□□□□ -1.97
RORAP35398 RPL37P4-201ENST00000448908 268 ntBASIC2.77□□□□□ -1.97
RORAP35398 RFC5P1-201ENST00000454419 874 ntBASIC2.77□□□□□ -1.97
RORAP35398 PNPLA4P1-201ENST00000458328 305 ntBASIC2.77□□□□□ -1.97
RORAP35398 AC092798.1-201ENST00000458542 409 ntBASIC2.77□□□□□ -1.97
RORAP35398 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.77□□□□□ -1.97
RORAP35398 SETP11-201ENST00000473027 690 ntBASIC2.77□□□□□ -1.97
RORAP35398 UBE2DNL-203ENST00000474922 222 ntBASIC2.77□□□□□ -1.97
RORAP35398 AC104982.1-201ENST00000478775 574 ntBASIC2.77□□□□□ -1.97
RORAP35398 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.77□□□□□ -1.97
RORAP35398 VN1R104P-201ENST00000505115 1009 ntBASIC2.77□□□□□ -1.97
RORAP35398 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.77□□□□□ -1.97
RORAP35398 SCGB1D5P-201ENST00000515134 247 ntBASIC2.77□□□□□ -1.97
RORAP35398 RN7SKP43-201ENST00000516173 320 ntBASIC2.77□□□□□ -1.97
RORAP35398 FAM60DP-201ENST00000524174 632 ntBASIC2.77□□□□□ -1.97
RORAP35398 AC118942.1-201ENST00000529674 1035 ntBASIC2.77□□□□□ -1.97
RORAP35398 AP000867.2-201ENST00000532468 320 ntBASIC2.77□□□□□ -1.97
RORAP35398 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.77□□□□□ -1.97
RORAP35398 GTF3AP2-201ENST00000557014 266 ntBASIC2.77□□□□□ -1.97
RORAP35398 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.77□□□□□ -1.97
RORAP35398 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.77□□□□□ -1.97
RORAP35398 ELOCP29-201ENST00000588193 334 ntBASIC2.77□□□□□ -1.97
RORAP35398 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.77□□□□□ -1.97
RORAP35398 AP002826.1-201ENST00000608835 315 ntBASIC2.77□□□□□ -1.97
RORAP35398 RNU6-1192P-201ENST00000612197 107 ntBASIC2.77□□□□□ -1.97
RORAP35398 RNU6-489P-201ENST00000618289 107 ntBASIC2.77□□□□□ -1.97
RORAP35398 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.77□□□□□ -1.97
RORAP35398 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.77□□□□□ -1.97
RORAP35398 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RORAP35398 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RORAP35398 AP000526.1-201ENST00000603308 1388 ntBASIC2.76□□□□□ -1.97
RORAP35398 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.76□□□□□ -1.97
RORAP35398 RNU4-51P-201ENST00000364206 140 ntBASIC2.76□□□□□ -1.97
RORAP35398 RNU6-1180P-201ENST00000364935 107 ntBASIC2.76□□□□□ -1.97
RORAP35398 SNORA9.2-201ENST00000365361 133 ntBASIC2.76□□□□□ -1.97
RORAP35398 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
RORAP35398 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
RORAP35398 SNORA40.2-201ENST00000390847 128 ntBASIC2.76□□□□□ -1.97
RORAP35398 RNU6-1000P-201ENST00000391066 106 ntBASIC2.76□□□□□ -1.97
RORAP35398 SNORA11.2-201ENST00000408318 127 ntBASIC2.76□□□□□ -1.97
RORAP35398 SNORD88.1-201ENST00000408684 91 ntBASIC2.76□□□□□ -1.97
RORAP35398 RNA5SP492-201ENST00000411330 114 ntBASIC2.76□□□□□ -1.97
RORAP35398 RPL19P1-201ENST00000411635 428 ntBASIC2.76□□□□□ -1.97
RORAP35398 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.76□□□□□ -1.97
RORAP35398 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.76□□□□□ -1.97
RORAP35398 GTF2IP3-201ENST00000433887 494 ntBASIC2.76□□□□□ -1.97
RORAP35398 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RORAP35398 SNRPGP6-201ENST00000451124 220 ntBASIC2.76□□□□□ -1.97
RORAP35398 Z82190.1-201ENST00000454534 490 ntBASIC2.76□□□□□ -1.97
RORAP35398 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.76□□□□□ -1.97
RORAP35398 MTCYBP16-201ENST00000509187 1129 ntBASIC2.76□□□□□ -1.97
RORAP35398 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms