Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GPC1P35052 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.42□□□□□ -1.54
GPC1P35052 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
GPC1P35052 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GPC1P35052 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GPC1P35052 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.42□□□□□ -1.54
GPC1P35052 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GPC1P35052 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.42□□□□□ -1.54
GPC1P35052 AC144833.1-201ENST00000567953 4089 ntBASIC5.41□□□□□ -1.54
GPC1P35052 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
GPC1P35052 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GPC1P35052 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GPC1P35052 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.41□□□□□ -1.54
GPC1P35052 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GPC1P35052 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
GPC1P35052 RNU6-607P-201ENST00000411283 108 ntBASIC5.41□□□□□ -1.54
GPC1P35052 CYCSP33-201ENST00000414485 327 ntBASIC5.41□□□□□ -1.54
GPC1P35052 AC063979.1-201ENST00000415539 377 ntBASIC5.41□□□□□ -1.54
GPC1P35052 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC1P35052 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC1P35052 VTI1BP4-201ENST00000427516 527 ntBASIC5.41□□□□□ -1.54
GPC1P35052 AC004866.2-201ENST00000438285 481 ntBASIC5.41□□□□□ -1.54
GPC1P35052 AL390119.1-201ENST00000440329 312 ntBASIC5.41□□□□□ -1.54
GPC1P35052 BX276092.4-201ENST00000452056 248 ntBASIC5.41□□□□□ -1.54
GPC1P35052 RNU6-1037P-201ENST00000459571 107 ntBASIC5.41□□□□□ -1.54
GPC1P35052 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC1P35052 AC009120.1-201ENST00000493458 473 ntBASIC5.41□□□□□ -1.54
GPC1P35052 DUTP1-201ENST00000493631 470 ntBASIC5.41□□□□□ -1.54
GPC1P35052 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.41□□□□□ -1.54
GPC1P35052 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC1P35052 AC090022.1-201ENST00000546569 311 ntBASIC5.41□□□□□ -1.54
GPC1P35052 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.41□□□□□ -1.54
GPC1P35052 LRRC37A5P-203ENST00000580181 585 ntBASIC5.41□□□□□ -1.54
GPC1P35052 MIR4271-201ENST00000582451 67 ntBASIC5.41□□□□□ -1.54
GPC1P35052 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC1P35052 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.41□□□□□ -1.54
GPC1P35052 AC123912.5-201ENST00000605470 343 ntBASIC5.41□□□□□ -1.54
GPC1P35052 AC090607.5-201ENST00000615692 224 ntBASIC5.41□□□□□ -1.54
GPC1P35052 U2.14-201ENST00000615943 113 ntBASIC5.41□□□□□ -1.54
GPC1P35052 MIR6130-201ENST00000619419 109 ntBASIC5.41□□□□□ -1.54
GPC1P35052 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.41□□□□□ -1.54
GPC1P35052 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.41□□□□□ -1.54
GPC1P35052 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
GPC1P35052 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
GPC1P35052 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GPC1P35052 AC018809.2-201ENST00000602436 3823 ntBASIC5.41□□□□□ -1.54
GPC1P35052 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GPC1P35052 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
GPC1P35052 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GPC1P35052 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
GPC1P35052 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
GPC1P35052 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GPC1P35052 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GPC1P35052 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.4□□□□□ -1.54
GPC1P35052 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GPC1P35052 RNU6-821P-201ENST00000390995 107 ntBASIC5.4□□□□□ -1.54
GPC1P35052 MRPL53P1-201ENST00000414323 319 ntBASIC5.4□□□□□ -1.54
GPC1P35052 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
GPC1P35052 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC1P35052 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC1P35052 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.4□□□□□ -1.54
GPC1P35052 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
GPC1P35052 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC1P35052 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.4□□□□□ -1.54
GPC1P35052 AL445433.1-201ENST00000457507 257 ntBASIC5.4□□□□□ -1.54
GPC1P35052 RPL23AP2-201ENST00000471227 466 ntBASIC5.4□□□□□ -1.54
GPC1P35052 AC074255.1-201ENST00000511259 501 ntBASIC5.4□□□□□ -1.54
GPC1P35052 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC1P35052 Y_RNA.667-201ENST00000516212 107 ntBASIC5.4□□□□□ -1.54
GPC1P35052 RN7SKP258-201ENST00000517151 304 ntBASIC5.4□□□□□ -1.54
GPC1P35052 RNU6-840P-201ENST00000517275 65 ntBASIC5.4□□□□□ -1.54
GPC1P35052 AC022559.1-201ENST00000520905 205 ntBASIC5.4□□□□□ -1.54
GPC1P35052 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.4□□□□□ -1.54
GPC1P35052 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.4□□□□□ -1.54
GPC1P35052 AL359219.2-201ENST00000555184 348 ntBASIC5.4□□□□□ -1.54
GPC1P35052 OR4H12P-201ENST00000556269 907 ntBASIC5.4□□□□□ -1.54
GPC1P35052 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.4□□□□□ -1.54
GPC1P35052 AL355812.1-201ENST00000603215 216 ntBASIC5.4□□□□□ -1.54
GPC1P35052 AL450472.3-201ENST00000615578 367 ntBASIC5.4□□□□□ -1.54
GPC1P35052 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
GPC1P35052 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GPC1P35052 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GPC1P35052 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
GPC1P35052 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.4□□□□□ -1.55
GPC1P35052 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GPC1P35052 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
GPC1P35052 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
GPC1P35052 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
GPC1P35052 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC1P35052 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC1P35052 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.39□□□□□ -1.55
GPC1P35052 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC1P35052 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC1P35052 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
GPC1P35052 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GPC1P35052 Y_RNA.76-201ENST00000362931 109 ntBASIC5.39□□□□□ -1.55
GPC1P35052 Y_RNA.358-201ENST00000365491 99 ntBASIC5.39□□□□□ -1.55
GPC1P35052 RNU6-1179P-201ENST00000384667 107 ntBASIC5.39□□□□□ -1.55
GPC1P35052 MIR135A2-201ENST00000384854 100 ntBASIC5.39□□□□□ -1.55
GPC1P35052 AC013442.1-201ENST00000397347 228 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms