Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL020991.1-201ENST00000612314 373 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AL110115.1-201ENST00000614396 364 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AC022509.4-201ENST00000621404 572 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AL356585.4-201ENST00000623078 1229 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.8□□□□□ -1.96
SHMT2P34897 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.8□□□□□ -1.96
SHMT2P34897 LRRC77P-213ENST00000637727 880 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHMT2P34897 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.8□□□□□ -1.96
SHMT2P34897 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
SHMT2P34897 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
SHMT2P34897 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.79□□□□□ -1.96
SHMT2P34897 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.79□□□□□ -1.96
SHMT2P34897 SGO1P2-201ENST00000429458 1589 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SHMT2P34897 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.79□□□□□ -1.96
SHMT2P34897 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHMT2P34897 AC091390.3-201ENST00000426478 338 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AL590233.1-201ENST00000430017 456 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SHMT2P34897 AC107083.1-201ENST00000439643 279 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 MTCO2P25-201ENST00000447065 681 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.79□□□□□ -1.96
SHMT2P34897 NIPA2P5-201ENST00000452282 464 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 GSTA11P-201ENST00000452866 669 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.79□□□□□ -1.96
SHMT2P34897 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.79□□□□□ -1.96
SHMT2P34897 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.79□□□□□ -1.96
SHMT2P34897 AC023424.2-201ENST00000493479 777 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AC114981.1-201ENST00000503897 678 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 UBE2V1P12-201ENST00000503954 474 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AC097462.2-201ENST00000504623 481 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 KLHL2P1-201ENST00000508691 521 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.79□□□□□ -1.96
SHMT2P34897 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.79□□□□□ -1.96
SHMT2P34897 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.79□□□□□ -1.96
SHMT2P34897 AC006499.2-201ENST00000513470 337 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 RNU6-583P-201ENST00000516012 92 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.79□□□□□ -1.96
SHMT2P34897 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.79□□□□□ -1.96
SHMT2P34897 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.79□□□□□ -1.96
SHMT2P34897 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.79□□□□□ -1.96
SHMT2P34897 AC023813.2-201ENST00000564321 469 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHMT2P34897 FAM60BP-201ENST00000578364 658 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 MIR4509-3-201ENST00000578671 94 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHMT2P34897 MIR4509-2-201ENST00000583920 94 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 SNORD84-203ENST00000584275 78 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 BNIP3P39-201ENST00000601077 554 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 BDH2P1-201ENST00000602288 736 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AC024153.1-201ENST00000603103 365 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AC021749.1-201ENST00000604322 607 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AP001330.4-201ENST00000604350 154 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AL157392.4-201ENST00000609756 345 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 AC107075.1-201ENST00000613695 314 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 MIR4509-1-201ENST00000618224 94 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.79□□□□□ -1.96
SHMT2P34897 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.79□□□□□ -1.96
SHMT2P34897 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SHMT2P34897 GABRG2-229ENST00000641017 3628 ntBASIC2.79□□□□□ -1.96
SHMT2P34897 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.79□□□□□ -1.96
SHMT2P34897 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.78□□□□□ -1.96
SHMT2P34897 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.78□□□□□ -1.96
SHMT2P34897 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SHMT2P34897 RNU6-560P-201ENST00000364007 108 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 RNU6-7-201ENST00000364784 107 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 RNU6-8-201ENST00000365467 107 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 RNU6-1122P-201ENST00000384449 107 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 HMGB1P17-201ENST00000403495 628 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 RNU4-65P-201ENST00000410473 140 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.78□□□□□ -1.96
SHMT2P34897 COTL1P1-201ENST00000422309 375 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.78□□□□□ -1.96
SHMT2P34897 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 MTCO1P39-201ENST00000426148 480 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 SAR1AP4-201ENST00000429225 591 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.78□□□□□ -1.96
SHMT2P34897 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.78□□□□□ -1.96
SHMT2P34897 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.78□□□□□ -1.96
SHMT2P34897 RPL17P49-201ENST00000443728 411 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 AC007327.1-201ENST00000447461 264 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 ZNF886P-201ENST00000450781 723 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.78□□□□□ -1.96
SHMT2P34897 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.78□□□□□ -1.96
SHMT2P34897 AC134050.1-201ENST00000495088 933 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 COX7A2P2-201ENST00000505291 250 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.78□□□□□ -1.96
SHMT2P34897 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.78□□□□□ -1.96
SHMT2P34897 GMPSP1-201ENST00000514075 579 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.78□□□□□ -1.96
SHMT2P34897 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.78□□□□□ -1.96
SHMT2P34897 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.78□□□□□ -1.96
SHMT2P34897 MTCO3P24-201ENST00000572729 782 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 LARP7P3-201ENST00000579888 337 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 AC023043.3-201ENST00000593113 385 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.78□□□□□ -1.96
SHMT2P34897 RNU4-5P-201ENST00000607255 135 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms