Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 BNIP3P1-201ENST00000547295 580 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 MIR3171-201ENST00000584270 74 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC12P31275 AL670379.10-201ENST00000604330 253 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 AL670379.9-201ENST00000605428 253 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 HMGN2P28-201ENST00000606102 262 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXC12P31275 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXC12P31275 AL445363.3-201ENST00000623080 671 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 AC006065.5-201ENST00000623427 349 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 MIR7641-1-201ENST00000627518 61 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HOXC12P31275 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HOXC12P31275 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HOXC12P31275 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC12P31275 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC12P31275 AP001029.2-203ENST00000589795 4910 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 RPL32P3-201ENST00000359025 275 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 RNU6-288P-201ENST00000363690 104 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 RNVU1-6-201ENST00000364688 164 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC12P31275 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC12P31275 RNU6-76P-201ENST00000384060 104 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 RNU6-474P-201ENST00000384243 107 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 MIR559-201ENST00000385188 96 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 RNY4P36-201ENST00000391116 96 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 MIR450B-201ENST00000401182 78 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 MTCYBP4-201ENST00000401524 249 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 RNU6-370P-201ENST00000411008 104 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 AC092809.3-201ENST00000415453 231 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 AL139396.1-201ENST00000421137 167 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 RPL23AP89-201ENST00000439324 255 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 TDGF1P1-201ENST00000445734 527 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 AC009127.1-201ENST00000467090 155 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 DYNLL1P5-201ENST00000467158 270 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 RN7SL481P-201ENST00000477764 299 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 RPS27AP13-201ENST00000498403 237 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 RPS27P27-201ENST00000498779 255 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.59□□□□□ -1.67
HOXC12P31275 AC005741.1-201ENST00000511094 432 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC12P31275 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC12P31275 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC12P31275 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC12P31275 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC12P31275 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC12P31275 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC12P31275 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC12P31275 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC12P31275 AC067852.3-201ENST00000589177 561 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
HOXC12P31275 DPPA3P3-201ENST00000603842 430 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 AC010632.3-201ENST00000611377 369 ntBASIC4.59□□□□□ -1.67
HOXC12P31275 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC12P31275 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC12P31275 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC12P31275 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC12P31275 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXC12P31275 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC12P31275 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC12P31275 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC12P31275 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HOXC12P31275 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC12P31275 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC12P31275 SNORD42.2-201ENST00000365570 69 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HOXC12P31275 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC12P31275 RNU6-1074P-201ENST00000383995 104 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 RNU6-14P-201ENST00000384630 106 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 SNORA16.2-201ENST00000390991 127 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 AL080315.1-201ENST00000406055 466 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 RNA5SP239-201ENST00000410218 129 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 RPL7AP49-201ENST00000429522 581 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 AL591438.1-201ENST00000433508 581 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC12P31275 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC12P31275 AL359073.1-201ENST00000448036 403 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC12P31275 AC091180.1-201ENST00000462104 372 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 HMGB3P15-201ENST00000507326 574 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXC12P31275 AC004980.4-201ENST00000513375 203 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 AC006427.1-201ENST00000514359 712 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 SNORA31.22-201ENST00000517204 135 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC12P31275 COPS8P3-201ENST00000526024 482 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 AC007151.1-201ENST00000572774 483 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 AC138761.3-201ENST00000579993 334 ntBASIC4.58□□□□□ -1.68
HOXC12P31275 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXC12P31275 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXC12P31275 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC12P31275 AC022893.3-201ENST00000607665 437 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms