Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL139095.1-201ENST00000404326 391 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AL139098.1-201ENST00000407291 389 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 FCF1P2-201ENST00000415284 583 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC233981.1-201ENST00000423224 461 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.82□□□□□ -1.96
HOXA9P31269 UBE2D3P2-201ENST00000424409 445 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC112220.1-201ENST00000434628 355 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 MTCO1P53-201ENST00000441633 699 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 OR6K1P-201ENST00000456766 971 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC003982.1-202ENST00000469928 248 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC090525.1-201ENST00000479116 478 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.82□□□□□ -1.96
HOXA9P31269 DYNLL1P6-201ENST00000503440 264 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC113420.1-201ENST00000507903 571 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC026412.2-201ENST00000512270 1075 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXA9P31269 RNA5SP135-201ENST00000517019 125 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 AC021451.1-201ENST00000523498 1129 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HOXA9P31269 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 SETP2-201ENST00000553886 926 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 MIR3605-201ENST00000583214 100 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 AC069234.5-201ENST00000611056 416 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC008083.4-201ENST00000615076 444 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC123767.1-202ENST00000620407 817 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXA9P31269 AC099654.9-201ENST00000637055 678 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA9P31269 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
HOXA9P31269 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HOXA9P31269 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.81□□□□□ -1.96
HOXA9P31269 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXA9P31269 RNU6-839P-201ENST00000363347 108 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
HOXA9P31269 RNU6-224P-201ENST00000384055 107 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 Y_RNA.493-201ENST00000384422 102 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 AL356057.3-201ENST00000402607 340 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HOXA9P31269 RNA5SP344-201ENST00000411081 104 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 RAP1BP1-201ENST00000412709 553 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 RPS3AP9-201ENST00000417027 792 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 OFD1P18Y-201ENST00000420889 959 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXA9P31269 RAC1P8-201ENST00000427086 527 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXA9P31269 MTCYBP34-201ENST00000439552 670 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.81□□□□□ -1.96
HOXA9P31269 UBBP3-201ENST00000445497 241 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 EXOSC3P1-201ENST00000448649 500 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 AL034418.1-201ENST00000448675 860 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 AC009901.1-201ENST00000506703 541 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXA9P31269 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXA9P31269 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.81□□□□□ -1.96
HOXA9P31269 RNA5SP148-201ENST00000516527 94 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 AP001646.1-201ENST00000527936 915 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 AC022069.1-201ENST00000582910 658 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 SNORD39.3-201ENST00000584451 71 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXA9P31269 AL669831.4-202ENST00000590817 238 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HOXA9P31269 AL158163.2-201ENST00000619110 700 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 AC087821.2-201ENST00000637086 450 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 LRRC77P-213ENST00000637727 880 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 MFSD8-245ENST00000641743 948 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXA9P31269 ELF2P3-201ENST00000445099 1506 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXA9P31269 AC091564.4-201ENST00000533934 2194 ntBASIC2.81□□□□□ -1.96
HOXA9P31269 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
HOXA9P31269 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HOXA9P31269 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HOXA9P31269 XGY1-201ENST00000381172 446 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 RNU6-1226P-201ENST00000384317 107 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 RNU6-921P-201ENST00000384361 107 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 Y_RNA.578-201ENST00000390903 88 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 FAT1P1-201ENST00000406588 507 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 RNA5SP56-201ENST00000410277 118 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 RPL19P1-201ENST00000411635 428 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.8□□□□□ -1.96
HOXA9P31269 MTCO2P23-201ENST00000425216 680 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXA9P31269 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXA9P31269 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
HOXA9P31269 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.8□□□□□ -1.96
HOXA9P31269 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.8□□□□□ -1.96
HOXA9P31269 RNA5SP310-201ENST00000459084 116 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 RPL30P14-201ENST00000482744 348 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms