Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNGA1P29973 MIR4293-201ENST00000584305 78 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.76□□□□□ -1.65
CNGA1P29973 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.76□□□□□ -1.65
CNGA1P29973 AC069200.1-201ENST00000609511 323 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 AC007684.1-201ENST00000609671 477 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.76□□□□□ -1.65
CNGA1P29973 U4.5-201ENST00000617137 123 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 AL360181.4-201ENST00000621752 134 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 AL136313.1-201ENST00000624804 202 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 AC012442.3-202ENST00000636742 206 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 LRRC77P-213ENST00000637727 880 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CNGA1P29973 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CNGA1P29973 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.76□□□□□ -1.65
CNGA1P29973 AC009812.4-201ENST00000569134 1805 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNGA1P29973 AP001350.1-201ENST00000601906 1524 ntBASIC4.76□□□□□ -1.65
CNGA1P29973 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNGA1P29973 AC005832.2-201ENST00000538921 1430 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNGA1P29973 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
CNGA1P29973 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.75□□□□□ -1.65
CNGA1P29973 RNU6-511P-201ENST00000363496 107 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 RNU6-525P-201ENST00000363685 104 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 U3.11-201ENST00000364476 212 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNGA1P29973 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CNGA1P29973 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNGA1P29973 RNU4-55P-201ENST00000410731 137 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 RNA5SP107-201ENST00000411358 122 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 UBE2FP1-201ENST00000416536 447 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.75□□□□□ -1.65
CNGA1P29973 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.75□□□□□ -1.65
CNGA1P29973 AL500522.2-201ENST00000448562 343 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.75□□□□□ -1.65
CNGA1P29973 RPS11P1-201ENST00000451072 473 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.75□□□□□ -1.65
CNGA1P29973 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.75□□□□□ -1.65
CNGA1P29973 RPL38P1-201ENST00000460914 211 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 AP000926.1-201ENST00000479573 241 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 AC068305.1-201ENST00000497406 726 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 KLHL2P1-201ENST00000508691 521 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.75□□□□□ -1.65
CNGA1P29973 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.75□□□□□ -1.65
CNGA1P29973 AC010493.1-201ENST00000513479 292 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 RNU6-1220P-201ENST00000517126 108 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNGA1P29973 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.75□□□□□ -1.65
CNGA1P29973 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.75□□□□□ -1.65
CNGA1P29973 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.75□□□□□ -1.65
CNGA1P29973 AC008638.3-201ENST00000603341 463 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 AL139395.1-201ENST00000603662 160 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 AC126118.1-201ENST00000607744 628 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 AC091905.1-201ENST00000624400 311 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 MIR4275-201ENST00000636486 87 ntBASIC4.75□□□□□ -1.65
CNGA1P29973 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNGA1P29973 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.75□□□□□ -1.65
CNGA1P29973 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNGA1P29973 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.75□□□□□ -1.65
CNGA1P29973 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNGA1P29973 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNGA1P29973 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.75□□□□□ -1.65
CNGA1P29973 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CNGA1P29973 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CNGA1P29973 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.74□□□□□ -1.65
CNGA1P29973 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.74□□□□□ -1.65
CNGA1P29973 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
CNGA1P29973 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNGA1P29973 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CNGA1P29973 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.74□□□□□ -1.65
CNGA1P29973 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNGA1P29973 OR4G2P-201ENST00000328113 903 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 RNA5SP52-201ENST00000362448 134 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 RNY1P12-201ENST00000364251 105 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.74□□□□□ -1.65
CNGA1P29973 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNGA1P29973 MIR449B-201ENST00000384995 97 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 MIR181A1-201ENST00000385026 110 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 RPL23AP48-201ENST00000406913 488 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 MIR1911-201ENST00000410783 80 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.74□□□□□ -1.65
CNGA1P29973 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.74□□□□□ -1.65
CNGA1P29973 AL691449.1-201ENST00000426570 421 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 MTATP6P4-201ENST00000427725 675 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 AC073464.1-201ENST00000429823 534 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.74□□□□□ -1.65
CNGA1P29973 RPL21P112-201ENST00000434403 463 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 RPL23AP83-201ENST00000434984 473 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 AL353748.1-201ENST00000440753 474 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 PSPHP1-201ENST00000450062 261 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.74□□□□□ -1.65
CNGA1P29973 AC023598.1-201ENST00000472521 361 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CNGA1P29973 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.74□□□□□ -1.65
CNGA1P29973 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.74□□□□□ -1.65
CNGA1P29973 AC006499.6-201ENST00000511169 607 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 AC114797.1-201ENST00000514003 728 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 SNORA31.22-201ENST00000517204 135 ntBASIC4.74□□□□□ -1.65
CNGA1P29973 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms