Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AL590233.1-201ENST00000430017 456 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN4P29074 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN4P29074 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTPN4P29074 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN4P29074 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN4P29074 SDCBPP1-201ENST00000440192 890 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 OR6K5P-201ENST00000447050 945 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN4P29074 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN4P29074 SNORD11.1-201ENST00000459482 85 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN4P29074 AC097493.1-201ENST00000463958 372 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN4P29074 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN4P29074 XKRY-201ENST00000510392 1100 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 AC103783.1-201ENST00000520506 373 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.16□□□□□ -1.9
PTPN4P29074 MTND1P24-201ENST00000552175 861 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 AL512347.1-201ENST00000566420 503 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 AC005951.1-201ENST00000576706 485 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN4P29074 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 AC231657.1-201ENST00000624313 397 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN4P29074 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN4P29074 OR5BR1P-201ENST00000524992 1330 ntBASIC3.16□□□□□ -1.9
PTPN4P29074 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN4P29074 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.15□□□□□ -1.9
PTPN4P29074 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PTPN4P29074 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
PTPN4P29074 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
PTPN4P29074 RNA5SP374-201ENST00000362939 125 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 Y_RNA.111-201ENST00000363248 100 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 Y_RNA.192-201ENST00000363977 102 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 SNORA14A-201ENST00000364773 135 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN4P29074 MIR513B-201ENST00000385136 84 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AL031679.1-201ENST00000400616 525 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 RNU4-47P-201ENST00000410876 114 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 ELOCP9-201ENST00000418624 239 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN4P29074 AL390023.1-201ENST00000428836 262 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN4P29074 CR769776.1-201ENST00000441254 787 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 Z75741.1-201ENST00000446793 314 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 PTENP1-201ENST00000447117 1215 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 TMEM251P1-201ENST00000503717 318 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AC021678.1-201ENST00000505195 936 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN4P29074 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPN4P29074 AC024224.1-201ENST00000538284 609 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPN4P29074 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN4P29074 DNAJC8P1-201ENST00000554535 372 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN4P29074 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN4P29074 MIR4325-201ENST00000583049 90 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AC091057.2-201ENST00000602594 792 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AC012119.1-201ENST00000603184 222 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 DUXAP11-201ENST00000603858 526 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AL162713.1-201ENST00000604480 262 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AL022099.1-201ENST00000604551 712 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AC073657.2-201ENST00000605661 303 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN4P29074 AC013470.4-201ENST00000619978 986 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 AL353748.2-201ENST00000622148 471 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN4P29074 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
PTPN4P29074 MTND5P7-201ENST00000413558 1798 ntBASIC3.15□□□□□ -1.91
PTPN4P29074 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 DDX43P2-201ENST00000604753 1354 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN4P29074 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PTPN4P29074 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPN4P29074 RNU6-28P-201ENST00000362378 107 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 RNU6-1027P-201ENST00000383998 107 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 AL357075.1-201ENST00000404107 726 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 U3.42-201ENST00000408746 214 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPN4P29074 MRPL50P2-201ENST00000416821 482 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN4P29074 AL353678.1-201ENST00000422735 741 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 RPS12P18-201ENST00000442381 270 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.14□□□□□ -1.91
PTPN4P29074 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.14□□□□□ -1.91
PTPN4P29074 AC093392.2-201ENST00000450682 337 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 USP9YP10-201ENST00000454868 628 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 USP9YP25-201ENST00000457708 443 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 RPL7P5-201ENST00000471472 736 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN4P29074 RPL7P23-201ENST00000493874 747 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 VN1R104P-201ENST00000505115 1009 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN4P29074 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
PTPN4P29074 CBX3P3-201ENST00000508108 532 ntBASIC3.14□□□□□ -1.91
PTPN4P29074 AC006499.2-201ENST00000513470 337 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms