Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIG1P18858 AC117470.1-201ENST00000381974 330 ntBASIC5.43□□□□□ -1.54
LIG1P18858 MIR585-201ENST00000384887 94 ntBASIC5.43□□□□□ -1.54
LIG1P18858 MIR195-201ENST00000385194 87 ntBASIC5.43□□□□□ -1.54
LIG1P18858 RPS4XP9-201ENST00000405151 780 ntBASIC5.43□□□□□ -1.54
LIG1P18858 Y_RNA.605-201ENST00000410577 105 ntBASIC5.43□□□□□ -1.54
LIG1P18858 AC069218.2-201ENST00000411665 344 ntBASIC5.43□□□□□ -1.54
LIG1P18858 RPL37P10-201ENST00000412884 288 ntBASIC5.43□□□□□ -1.54
LIG1P18858 RPS12P23-201ENST00000419579 400 ntBASIC5.43□□□□□ -1.54
LIG1P18858 RPS17P8-201ENST00000434525 335 ntBASIC5.43□□□□□ -1.54
LIG1P18858 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.43□□□□□ -1.54
LIG1P18858 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.43□□□□□ -1.54
LIG1P18858 AC006466.1-201ENST00000438721 289 ntBASIC5.43□□□□□ -1.54
LIG1P18858 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.43□□□□□ -1.54
LIG1P18858 AL645939.1-201ENST00000453429 797 ntBASIC5.43□□□□□ -1.54
LIG1P18858 AC091685.2-201ENST00000454924 864 ntBASIC5.43□□□□□ -1.54
LIG1P18858 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.43□□□□□ -1.54
LIG1P18858 ELOCP24-201ENST00000456370 334 ntBASIC5.43□□□□□ -1.54
LIG1P18858 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.43□□□□□ -1.54
LIG1P18858 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.43□□□□□ -1.54
LIG1P18858 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.43□□□□□ -1.54
LIG1P18858 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.43□□□□□ -1.54
LIG1P18858 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.43□□□□□ -1.54
LIG1P18858 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.43□□□□□ -1.54
LIG1P18858 RNU2-10P-201ENST00000516375 211 ntBASIC5.43□□□□□ -1.54
LIG1P18858 RN7SKP82-201ENST00000516786 223 ntBASIC5.43□□□□□ -1.54
LIG1P18858 RNU6-566P-201ENST00000516790 107 ntBASIC5.43□□□□□ -1.54
LIG1P18858 RNA5SP503-201ENST00000517047 117 ntBASIC5.43□□□□□ -1.54
LIG1P18858 AP000857.1-201ENST00000532151 543 ntBASIC5.43□□□□□ -1.54
LIG1P18858 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.43□□□□□ -1.54
LIG1P18858 AL117187.1-201ENST00000555482 181 ntBASIC5.43□□□□□ -1.54
LIG1P18858 AC004817.2-201ENST00000561794 651 ntBASIC5.43□□□□□ -1.54
LIG1P18858 COX6CP3-201ENST00000580869 223 ntBASIC5.43□□□□□ -1.54
LIG1P18858 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.43□□□□□ -1.54
LIG1P18858 AC092807.2-201ENST00000609367 243 ntBASIC5.43□□□□□ -1.54
LIG1P18858 AL049539.1-201ENST00000611964 459 ntBASIC5.43□□□□□ -1.54
LIG1P18858 AC087588.2-201ENST00000617667 426 ntBASIC5.43□□□□□ -1.54
LIG1P18858 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.43□□□□□ -1.54
LIG1P18858 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LIG1P18858 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIG1P18858 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.43□□□□□ -1.54
LIG1P18858 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LIG1P18858 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.43□□□□□ -1.54
LIG1P18858 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIG1P18858 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.42□□□□□ -1.54
LIG1P18858 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LIG1P18858 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LIG1P18858 RNU6-308P-201ENST00000390957 107 ntBASIC5.42□□□□□ -1.54
LIG1P18858 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LIG1P18858 RNU6-370P-201ENST00000411008 104 ntBASIC5.42□□□□□ -1.54
LIG1P18858 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.42□□□□□ -1.54
LIG1P18858 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.42□□□□□ -1.54
LIG1P18858 RPS12P5-201ENST00000423449 371 ntBASIC5.42□□□□□ -1.54
LIG1P18858 Z74021.1-201ENST00000423610 407 ntBASIC5.42□□□□□ -1.54
LIG1P18858 AL360081.1-201ENST00000428299 555 ntBASIC5.42□□□□□ -1.54
LIG1P18858 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.42□□□□□ -1.54
LIG1P18858 AC093414.1-201ENST00000434712 514 ntBASIC5.42□□□□□ -1.54
LIG1P18858 AC105402.2-201ENST00000438503 358 ntBASIC5.42□□□□□ -1.54
LIG1P18858 HMGB3P11-201ENST00000440127 604 ntBASIC5.42□□□□□ -1.54
LIG1P18858 RAC1P7-201ENST00000445367 377 ntBASIC5.42□□□□□ -1.54
LIG1P18858 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.42□□□□□ -1.54
LIG1P18858 SNRPFP3-201ENST00000457792 225 ntBASIC5.42□□□□□ -1.54
LIG1P18858 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.42□□□□□ -1.54
LIG1P18858 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.42□□□□□ -1.54
LIG1P18858 Y_RNA.654-201ENST00000497848 106 ntBASIC5.42□□□□□ -1.54
LIG1P18858 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.42□□□□□ -1.54
LIG1P18858 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.42□□□□□ -1.54
LIG1P18858 AC098591.2-201ENST00000510152 315 ntBASIC5.42□□□□□ -1.54
LIG1P18858 RPL39P5-202ENST00000512505 151 ntBASIC5.42□□□□□ -1.54
LIG1P18858 OR7H2P-201ENST00000513483 306 ntBASIC5.42□□□□□ -1.54
LIG1P18858 RNU7-51P-201ENST00000516560 62 ntBASIC5.42□□□□□ -1.54
LIG1P18858 RNU6-794P-201ENST00000517261 64 ntBASIC5.42□□□□□ -1.54
LIG1P18858 MTND4P7-201ENST00000523876 130 ntBASIC5.42□□□□□ -1.54
LIG1P18858 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.42□□□□□ -1.54
LIG1P18858 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIG1P18858 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.42□□□□□ -1.54
LIG1P18858 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.42□□□□□ -1.54
LIG1P18858 EDDM3DP-201ENST00000554692 434 ntBASIC5.42□□□□□ -1.54
LIG1P18858 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.42□□□□□ -1.54
LIG1P18858 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.42□□□□□ -1.54
LIG1P18858 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.42□□□□□ -1.54
LIG1P18858 AC005191.1-201ENST00000603950 358 ntBASIC5.42□□□□□ -1.54
LIG1P18858 AL121932.1-201ENST00000605542 214 ntBASIC5.42□□□□□ -1.54
LIG1P18858 AL031666.3-201ENST00000609320 1006 ntBASIC5.42□□□□□ -1.54
LIG1P18858 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.42□□□□□ -1.54
LIG1P18858 AC067931.1-201ENST00000624190 671 ntBASIC5.42□□□□□ -1.54
LIG1P18858 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIG1P18858 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
LIG1P18858 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LIG1P18858 NXPH1-205ENST00000602349 1953 ntBASIC5.42□□□□□ -1.54
LIG1P18858 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LIG1P18858 MTND4P14-201ENST00000435799 1354 ntBASIC5.42□□□□□ -1.54
LIG1P18858 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.41□□□□□ -1.54
LIG1P18858 AC007390.2-201ENST00000606229 3803 ntBASIC5.41□□□□□ -1.54
LIG1P18858 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.41□□□□□ -1.54
LIG1P18858 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LIG1P18858 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LIG1P18858 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.41□□□□□ -1.54
LIG1P18858 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.41□□□□□ -1.54
LIG1P18858 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms