Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC048351.1-201ENST00000420064 602 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 BX510359.4-201ENST00000423750 193 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 Z82205.1-201ENST00000428456 297 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 AL590762.3-201ENST00000436372 640 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 ELOCP13-201ENST00000443934 329 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 USP9YP10-201ENST00000454868 628 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 NF1P3-201ENST00000457709 450 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGA1P17096 AC109464.2-201ENST00000510242 943 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 RN7SKP82-201ENST00000516786 223 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 RNA5SP364-201ENST00000516938 78 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGA1P17096 AC084851.1-201ENST00000529105 249 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGA1P17096 AL121839.1-201ENST00000556233 1185 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 AC044913.1-201ENST00000557200 430 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGA1P17096 snoU13.31-201ENST00000607291 104 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGA1P17096 AC022079.2-201ENST00000619739 566 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 AL353748.2-201ENST00000622148 471 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 AC090897.3-201ENST00000636973 1157 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 NSRP1P1-201ENST00000444067 1693 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 PABPC1P7-201ENST00000413177 1513 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGA1P17096 RNU6-60P-201ENST00000364792 103 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGA1P17096 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGA1P17096 RNU4-74P-201ENST00000411280 161 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 RPL23AP36-201ENST00000413895 458 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 AL357078.2-201ENST00000416486 427 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGA1P17096 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGA1P17096 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGA1P17096 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGA1P17096 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGA1P17096 AC096571.1-202ENST00000506634 735 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HMGA1P17096 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.66□□□□□ -2.14
HMGA1P17096 RNU1-104P-201ENST00000517280 175 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 OR4U1P-201ENST00000554958 912 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 RPS3AP4-201ENST00000555161 764 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGA1P17096 AC024614.2-201ENST00000577584 372 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGA1P17096 uc_338.20-201ENST00000621563 178 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 AP003122.6-201ENST00000623831 495 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGA1P17096 AC073055.1-201ENST00000456901 1621 ntBASIC1.66□□□□□ -2.14
HMGA1P17096 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HMGA1P17096 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
HMGA1P17096 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 RNU6-356P-201ENST00000384140 107 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMGA1P17096 AL450338.1-201ENST00000407987 512 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 RNU6-1077P-201ENST00000410506 102 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGA1P17096 RPS26P56-201ENST00000444468 240 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 AMD1P1-201ENST00000457220 922 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 RNU7-95P-201ENST00000459222 64 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGA1P17096 MTND2P17-201ENST00000550281 688 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 ANP32BP3-201ENST00000559213 706 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGA1P17096 OR4K8P-201ENST00000578842 1048 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGA1P17096 AC006329.2-201ENST00000611491 394 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMGA1P17096 ZNF734P-201ENST00000419494 1534 ntBASIC1.65□□□□□ -2.15
HMGA1P17096 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMGA1P17096 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMGA1P17096 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC1.64□□□□□ -2.15
HMGA1P17096 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMGA1P17096 RNU6-14P-201ENST00000384630 106 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 MIR1323-201ENST00000408090 73 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.64□□□□□ -2.15
HMGA1P17096 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGA1P17096 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGA1P17096 HMGB1P31-201ENST00000437242 427 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.64□□□□□ -2.15
HMGA1P17096 AC021146.7-201ENST00000509604 775 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 SUB1P1-201ENST00000524415 382 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 AC087373.1-201ENST00000524920 491 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 AP005435.4-201ENST00000529514 284 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 NOP56P3-201ENST00000549457 385 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 DNAJC8P1-201ENST00000554535 372 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 DNAJC19P9-201ENST00000555084 351 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGA1P17096 SNORD53B-201ENST00000577887 78 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 AC103987.3-201ENST00000582071 292 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMGA1P17096 MIR203B-201ENST00000636080 86 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HMGA1P17096 ZNF33CP-201ENST00000432492 2030 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 AC090740.1-201ENST00000623193 2262 ntBASIC1.64□□□□□ -2.15
HMGA1P17096 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HMGA1P17096 MTND5P3-201ENST00000438536 1800 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms