Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 HMGB1P36-201ENST00000487709 576 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 AC093809.1-201ENST00000509155 340 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PDGFRAP16234 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.43□□□□□ -1.86
PDGFRAP16234 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFRAP16234 AP003497.1-201ENST00000528472 562 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFRAP16234 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.43□□□□□ -1.86
PDGFRAP16234 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.43□□□□□ -1.86
PDGFRAP16234 MTCO3P24-201ENST00000572729 782 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 AC136618.2-201ENST00000575091 400 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.43□□□□□ -1.86
PDGFRAP16234 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.43□□□□□ -1.86
PDGFRAP16234 AC034229.4-201ENST00000607861 441 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 AC090740.1-201ENST00000623193 2262 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 ZNF807-201ENST00000328088 1707 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFRAP16234 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFRAP16234 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFRAP16234 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFRAP16234 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PDGFRAP16234 DEFB108F-201ENST00000344638 222 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFRAP16234 SKINT1L-201ENST00000401057 817 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 RPS3AP24-201ENST00000407896 734 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 MIR320C1-201ENST00000408566 88 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 U3.42-201ENST00000408746 214 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 RN7SKP266-201ENST00000410232 287 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 RNA5SP107-201ENST00000411358 122 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFRAP16234 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.42□□□□□ -1.86
PDGFRAP16234 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFRAP16234 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.42□□□□□ -1.86
PDGFRAP16234 RPS15AP6-201ENST00000420703 385 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFRAP16234 HSPE1P1-201ENST00000421494 318 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 SNRPEP4-201ENST00000435815 279 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.42□□□□□ -1.86
PDGFRAP16234 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFRAP16234 AC140076.1-201ENST00000449897 361 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 RPL36AP33-201ENST00000450395 310 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFRAP16234 MTND1P9-201ENST00000453775 944 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFRAP16234 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.42□□□□□ -1.86
PDGFRAP16234 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.42□□□□□ -1.86
PDGFRAP16234 RPL7P5-201ENST00000471472 736 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 AC021382.1-201ENST00000483523 359 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.42□□□□□ -1.86
PDGFRAP16234 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.42□□□□□ -1.86
PDGFRAP16234 DEFB108D-201ENST00000527787 222 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PDGFRAP16234 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.42□□□□□ -1.86
PDGFRAP16234 AC004024.1-201ENST00000549244 247 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 HIGD1AP1-201ENST00000550979 275 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 COX6CP3-201ENST00000580869 223 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 AC008507.1-201ENST00000587506 734 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 AP001429.1-201ENST00000602568 530 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 AL158211.4-201ENST00000606988 584 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 AC024560.3-201ENST00000608482 349 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.42□□□□□ -1.86
PDGFRAP16234 AL157817.1-201ENST00000614264 790 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 AL450472.3-201ENST00000615578 367 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.42□□□□□ -1.86
PDGFRAP16234 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFRAP16234 MTCO1P9-201ENST00000505577 1534 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFRAP16234 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.42□□□□□ -1.86
PDGFRAP16234 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFRAP16234 SRP72P2-201ENST00000344851 1979 ntBASIC3.42□□□□□ -1.86
PDGFRAP16234 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFRAP16234 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFRAP16234 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFRAP16234 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PDGFRAP16234 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PDGFRAP16234 RNA5SP229-201ENST00000410809 99 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AC063979.1-201ENST00000415539 377 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 RPL27AP8-201ENST00000424277 446 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 BX119904.4-201ENST00000424402 301 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFRAP16234 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.41□□□□□ -1.86
PDGFRAP16234 YWHAZP7-201ENST00000436906 631 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AC091862.1-201ENST00000438016 1100 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 RPL26P6-201ENST00000440913 438 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 Z99127.3-201ENST00000448158 395 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFRAP16234 AC093392.2-201ENST00000450682 337 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AC091179.1-201ENST00000461606 579 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFRAP16234 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFRAP16234 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.41□□□□□ -1.86
PDGFRAP16234 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.41□□□□□ -1.86
PDGFRAP16234 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFRAP16234 MTCYBP43-201ENST00000513621 740 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 SNORA70.16-201ENST00000516390 95 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.41□□□□□ -1.86
PDGFRAP16234 EEF1A1P37-201ENST00000522748 715 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 FAM60DP-201ENST00000524174 632 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms