Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL022099.1-201ENST00000604551 712 ntBASIC2.58□□□□□ -2
TPM3P06753 AC013562.2-201ENST00000611632 603 ntBASIC2.58□□□□□ -2
TPM3P06753 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.58□□□□□ -2
TPM3P06753 HMGB1P24-202ENST00000615653 685 ntBASIC2.58□□□□□ -2
TPM3P06753 UCA1.1-201ENST00000620952 75 ntBASIC2.58□□□□□ -2
TPM3P06753 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.58□□□□□ -2
TPM3P06753 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.58□□□□□ -2
TPM3P06753 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.57□□□□□ -2
TPM3P06753 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TPM3P06753 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.57□□□□□ -2
TPM3P06753 AL591416.1-201ENST00000404015 867 ntBASIC2.57□□□□□ -2
TPM3P06753 AL023807.1-201ENST00000407932 359 ntBASIC2.57□□□□□ -2
TPM3P06753 UBE2V1P11-201ENST00000411559 285 ntBASIC2.57□□□□□ -2
TPM3P06753 AC019097.1-201ENST00000424783 735 ntBASIC2.57□□□□□ -2
TPM3P06753 MTCO3P30-201ENST00000426425 670 ntBASIC2.57□□□□□ -2
TPM3P06753 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.57□□□□□ -2
TPM3P06753 ARPC3P1-201ENST00000437218 533 ntBASIC2.57□□□□□ -2
TPM3P06753 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.57□□□□□ -2
TPM3P06753 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.57□□□□□ -2
TPM3P06753 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.57□□□□□ -2
TPM3P06753 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.57□□□□□ -2
TPM3P06753 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.57□□□□□ -2
TPM3P06753 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.57□□□□□ -2
TPM3P06753 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.57□□□□□ -2
TPM3P06753 AC090888.1-201ENST00000561335 1141 ntBASIC2.57□□□□□ -2
TPM3P06753 MIR3117-201ENST00000584034 78 ntBASIC2.57□□□□□ -2
TPM3P06753 AC005229.3-201ENST00000603438 323 ntBASIC2.57□□□□□ -2
TPM3P06753 AP000254.1-201ENST00000609934 520 ntBASIC2.57□□□□□ -2
TPM3P06753 AL137790.1-201ENST00000634283 177 ntBASIC2.57□□□□□ -2
TPM3P06753 AC069528.2-201ENST00000624849 1991 ntBASIC2.57□□□□□ -2
TPM3P06753 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
TPM3P06753 SDAD1P2-201ENST00000441308 2028 ntBASIC2.57□□□□□ -2
TPM3P06753 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TPM3P06753 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.57□□□□□ -2
TPM3P06753 TPTE2P4-201ENST00000258589 1605 ntBASIC2.57□□□□□ -2
TPM3P06753 AC008568.2-201ENST00000623862 2313 ntBASIC2.56□□□□□ -2
TPM3P06753 RNU1-105P-201ENST00000363470 161 ntBASIC2.56□□□□□ -2
TPM3P06753 RNU4-52P-201ENST00000384209 138 ntBASIC2.56□□□□□ -2
TPM3P06753 MIR34A-201ENST00000385130 110 ntBASIC2.56□□□□□ -2
TPM3P06753 U3.40-201ENST00000408706 208 ntBASIC2.56□□□□□ -2
TPM3P06753 COTL1P1-201ENST00000422309 375 ntBASIC2.56□□□□□ -2
TPM3P06753 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.56□□□□□ -2
TPM3P06753 AC063976.3-201ENST00000426849 329 ntBASIC2.56□□□□□ -2
TPM3P06753 RPL7L1P10-201ENST00000427790 463 ntBASIC2.56□□□□□ -2
TPM3P06753 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.56□□□□□ -2
TPM3P06753 ZNF965P-201ENST00000432501 817 ntBASIC2.56□□□□□ -2
TPM3P06753 WASF1P1-201ENST00000447560 1131 ntBASIC2.56□□□□□ -2
TPM3P06753 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.56□□□□□ -2
TPM3P06753 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.56□□□□□ -2
TPM3P06753 snoU13.28-201ENST00000459235 104 ntBASIC2.56□□□□□ -2
TPM3P06753 AC080014.1-201ENST00000496877 1201 ntBASIC2.56□□□□□ -2
TPM3P06753 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
TPM3P06753 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.56□□□□□ -2
TPM3P06753 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
TPM3P06753 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.56□□□□□ -2
TPM3P06753 BNIP3P4-201ENST00000604946 565 ntBASIC2.56□□□□□ -2
TPM3P06753 AC096577.2-201ENST00000611455 153 ntBASIC2.56□□□□□ -2
TPM3P06753 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.56□□□□□ -2
TPM3P06753 AC012640.5-201ENST00000623897 319 ntBASIC2.56□□□□□ -2
TPM3P06753 AP000553.5-201ENST00000641933 54 ntBASIC2.56□□□□□ -2
TPM3P06753 CR848007.1-201ENST00000442354 1699 ntBASIC2.56□□□□□ -2
TPM3P06753 AC073346.2-201ENST00000624724 2058 ntBASIC2.56□□□□□ -2
TPM3P06753 AL137003.2-201ENST00000606924 2538 ntBASIC2.56□□□□□ -2
TPM3P06753 OR56A5-201ENST00000340110 738 ntBASIC2.55□□□□□ -2
TPM3P06753 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
TPM3P06753 AL589655.1-201ENST00000405398 482 ntBASIC2.55□□□□□ -2
TPM3P06753 RNU6-77P-201ENST00000410554 91 ntBASIC2.55□□□□□ -2
TPM3P06753 ARL2BPP3-201ENST00000421226 480 ntBASIC2.55□□□□□ -2
TPM3P06753 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.55□□□□□ -2
TPM3P06753 HMGN2P38-201ENST00000423806 265 ntBASIC2.55□□□□□ -2
TPM3P06753 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.55□□□□□ -2
TPM3P06753 RPL23AP23-201ENST00000452590 471 ntBASIC2.55□□□□□ -2
TPM3P06753 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.55□□□□□ -2
TPM3P06753 RPS27P21-201ENST00000486977 252 ntBASIC2.55□□□□□ -2
TPM3P06753 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.55□□□□□ -2
TPM3P06753 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.55□□□□□ -2
TPM3P06753 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
TPM3P06753 GLYCAM1-201ENST00000546596 285 ntBASIC2.55□□□□□ -2
TPM3P06753 AC007179.3-201ENST00000604976 235 ntBASIC2.55□□□□□ -2
TPM3P06753 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.55□□□□□ -2
TPM3P06753 AC091925.2-201ENST00000625059 256 ntBASIC2.55□□□□□ -2
TPM3P06753 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.55□□□□□ -2
TPM3P06753 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.55□□□□□ -2
TPM3P06753 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TPM3P06753 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.55□□□□□ -2
TPM3P06753 RNU6-1155P-201ENST00000363554 107 ntBASIC2.54□□□□□ -2
TPM3P06753 SNORD115-48-201ENST00000364764 76 ntBASIC2.54□□□□□ -2
TPM3P06753 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.54□□□□□ -2
TPM3P06753 AC107083.1-201ENST00000439643 279 ntBASIC2.54□□□□□ -2
TPM3P06753 AC000041.1-201ENST00000439655 175 ntBASIC2.54□□□□□ -2
TPM3P06753 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.54□□□□□ -2
TPM3P06753 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.54□□□□□ -2
TPM3P06753 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.54□□□□□ -2
TPM3P06753 RPL21P133-201ENST00000443666 476 ntBASIC2.54□□□□□ -2
TPM3P06753 AC044797.1-201ENST00000445744 679 ntBASIC2.54□□□□□ -2
TPM3P06753 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.54□□□□□ -2
TPM3P06753 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.54□□□□□ -2
TPM3P06753 RPL30P5-201ENST00000494923 336 ntBASIC2.54□□□□□ -2
TPM3P06753 NDUFB4P2-201ENST00000509515 391 ntBASIC2.54□□□□□ -2
TPM3P06753 RNU1-40P-201ENST00000516816 164 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms